Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2403

Experiment: Cephalothin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.00390625 mg/ml
2,476,465	-		Synpcc7942_2402	0.39	-1.9
2,476,767	-		Synpcc7942_2402	0.66	-2.3
2,476,852	+		Synpcc7942_2402	0.73	-1.1
2,476,860	-		Synpcc7942_2402	0.74	-1.4
2,476,906	-		Synpcc7942_2402	0.78	-1.4
2,477,096	-				-0.1
2,477,101	-				-2.1
2,477,138	+				+4.1
2,477,146	+				-0.1
2,477,178	-				-0.1
2,477,193	+				-0.1
2,477,197	+				+0.6
2,477,201	-				-1.7
2,477,221	-				-1.9
2,477,295	-				-0.8
2,477,305	-				-1.0
2,477,322	+				-0.7
2,477,332	+				-1.4
2,477,340	-				+1.4
2,477,344	+				+0.9
2,477,345	-				+3.5
2,477,352	-				-2.5
2,477,355	-				-0.7
2,477,355	-				+2.0
2,477,378	+				-0.7
2,477,408	-				+2.1
2,477,421	+				+2.1
2,477,422	+				-0.7
2,477,422	+				-0.1
2,477,441	-				+1.0
2,477,480	+				-1.4
2,477,486	-				-0.4
2,477,486	-				-1.1
2,477,488	-				+3.5
2,477,488	-				-0.7
2,477,488	-				+3.6
2,477,488	-				+5.0
2,477,488	-				+0.2
2,477,488	-				+0.5
2,477,488	-				-0.4
2,477,490	+				-1.9
2,477,536	+				-1.4
2,477,536	+		Synpcc7942_2403	0.25	-0.1
2,477,536	+		Synpcc7942_2403	0.25	-0.4
2,477,544	-		Synpcc7942_2403	0.28	-0.1
2,477,544	-		Synpcc7942_2403	0.28	-2.7
2,477,554	+		Synpcc7942_2403	0.32	+0.3
2,477,554	-		Synpcc7942_2403	0.32	+0.9
2,477,556	-		Synpcc7942_2403	0.32	+2.2
2,477,562	-		Synpcc7942_2403	0.34	+1.1
2,477,572	-		Synpcc7942_2403	0.38	+3.6
2,477,598	+		Synpcc7942_2403	0.47	+2.2
2,477,628	+		Synpcc7942_2403	0.58	-2.1
2,477,636	-		Synpcc7942_2403	0.60	-0.4
2,477,636	-		Synpcc7942_2403	0.60	-2.9
2,477,661	-		Synpcc7942_2403	0.69	+1.2
2,477,675	+		Synpcc7942_2403	0.74	+0.3
2,477,675	+		Synpcc7942_2403	0.74	-1.4
2,477,675	+		Synpcc7942_2403	0.74	-0.0
2,477,677	+				+0.3
2,477,677	+		Synpcc7942_2403	0.75	-2.1
2,477,685	-		Synpcc7942_2403	0.78	-2.7
2,477,685	-		Synpcc7942_2403	0.78	-0.2
2,477,697	+		Synpcc7942_2403	0.82	-0.6
2,477,698	+		Synpcc7942_2403	0.82	+1.4
2,477,718	+		Synpcc7942_2403	0.89	+2.5
2,477,742	+				+4.6
2,477,790	+				-0.7
2,477,791	-				+0.2
2,477,798	-				+1.8
2,477,801	-				+0.5
2,477,874	-				-0.1
2,477,880	-				-1.1
2,477,920	+		Synpcc7942_2404	0.15	-1.7
2,477,925	+		Synpcc7942_2404	0.16	-1.1
2,477,933	-		Synpcc7942_2404	0.17	+3.9
2,477,947	+		Synpcc7942_2404	0.19	-0.3
2,477,949	+		Synpcc7942_2404	0.19	+0.2
2,477,976	-		Synpcc7942_2404	0.23	-1.1
2,477,987	+		Synpcc7942_2404	0.24	+4.2
2,477,997	+		Synpcc7942_2404	0.26	+3.0
2,478,011	-		Synpcc7942_2404	0.28	-1.4
2,478,021	-		Synpcc7942_2404	0.29	-1.9
2,478,021	-		Synpcc7942_2404	0.29	-0.7
2,478,027	-		Synpcc7942_2404	0.30	+0.9
2,478,047	+		Synpcc7942_2404	0.32	-2.1
2,478,060	+		Synpcc7942_2404	0.34	-1.4
2,478,061	-		Synpcc7942_2404	0.34	+3.6
2,478,068	-		Synpcc7942_2404	0.35	-0.3
2,478,172	-		Synpcc7942_2404	0.49	+1.4
2,478,191	+		Synpcc7942_2404	0.52	+1.9
2,478,191	+		Synpcc7942_2404	0.52	+3.4
2,478,199	-		Synpcc7942_2404	0.53	-2.3
2,478,199	-		Synpcc7942_2404	0.53	-0.1
2,478,236	-		Synpcc7942_2404	0.58	+0.9
2,478,256	+		Synpcc7942_2404	0.61	+0.9
2,478,261	+		Synpcc7942_2404	0.61	-0.7
2,478,261	+		Synpcc7942_2404	0.61	+1.9
2,478,323	+		Synpcc7942_2404	0.70	-0.7
2,478,331	-		Synpcc7942_2404	0.71	-1.1
2,478,347	+		Synpcc7942_2404	0.73	+1.3
2,478,347	+		Synpcc7942_2404	0.73	-0.1
2,478,365	+		Synpcc7942_2404	0.75	-0.1
2,478,375	+		Synpcc7942_2404	0.77	+0.9
2,478,380	+		Synpcc7942_2404	0.77	-0.8
2,478,389	+		Synpcc7942_2404	0.79	-0.7
2,478,419	+		Synpcc7942_2404	0.83	+0.5
2,478,613	+				+2.9
2,478,626	+				+0.0
2,478,629	+				+1.9
2,478,631	-				-1.9
2,478,684	-				+0.5
2,478,687	+				-0.1
2,478,695	-				-2.1
2,478,703	-				-0.7
2,478,713	+				+2.4
2,478,730	+				+0.9
2,478,731	+				-2.3
2,478,731	+				+1.1
2,478,731	+				+1.1
2,478,736	+				-1.1
2,478,736	+				+3.6
2,478,736	+				+1.2
2,478,739	-				+0.9
2,478,739	-				+1.7
2,478,739	-				+0.9
2,478,744	-				-4.6
2,478,744	-				-2.4
2,478,744	-				-0.7