Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2326

Experiment: Cephalothin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.00390625 mg/ml
2,392,513	-		Synpcc7942_2325	0.24	-0.1
2,392,539	+		Synpcc7942_2325	0.28	+1.0
2,392,547	-		Synpcc7942_2325	0.29	+0.9
2,392,597	-		Synpcc7942_2325	0.35	-0.7
2,392,600	+		Synpcc7942_2325	0.36	+1.8
2,392,608	-		Synpcc7942_2325	0.37	-0.7
2,392,676	+		Synpcc7942_2325	0.45	+2.7
2,392,709	+		Synpcc7942_2325	0.50	+3.5
2,392,713	-		Synpcc7942_2325	0.50	+0.7
2,392,713	-		Synpcc7942_2325	0.50	-2.1
2,392,713	-		Synpcc7942_2325	0.50	-2.1
2,392,767	+		Synpcc7942_2325	0.57	+0.5
2,392,794	-		Synpcc7942_2325	0.61	-1.9
2,392,821	-		Synpcc7942_2325	0.64	+2.6
2,392,833	+		Synpcc7942_2325	0.66	+0.5
2,392,834	+		Synpcc7942_2325	0.66	+1.3
2,392,842	-		Synpcc7942_2325	0.67	-0.1
2,392,848	-		Synpcc7942_2325	0.68	+1.6
2,392,868	+		Synpcc7942_2325	0.70	+1.7
2,392,917	+		Synpcc7942_2325	0.77	+3.4
2,392,978	-		Synpcc7942_2325	0.85	-2.8
2,392,999	+		Synpcc7942_2325	0.88	-1.1
2,393,000	-		Synpcc7942_2325	0.88	+3.2
2,393,014	+		Synpcc7942_2325	0.89	-2.1
2,393,046	+				+3.2
2,393,046	+				+2.3
2,393,054	-				+1.5
2,393,054	-				-0.1
2,393,151	+				-0.1
2,393,151	+				+1.9
2,393,151	+				-0.4
2,393,156	+				-1.0
2,393,164	-				-1.4
2,393,166	+				+1.6
2,393,174	-				+3.4
2,393,193	-				-0.9
2,393,193	-				-1.2
2,393,200	-				+0.3
2,393,206	+				-0.1
2,393,206	+				+0.3
2,393,234	-				-1.7
2,393,236	+				+1.0
2,393,245	+				-0.5
2,393,250	+				-1.5
2,393,250	+				-1.4
2,393,250	+				-0.1
2,393,250	+				-0.8
2,393,250	+				+0.9
2,393,258	-				+1.9
2,393,258	-				+1.0
2,393,269	+				-0.1
2,393,269	+				-1.7
2,393,279	-				+4.6
2,393,296	+				+1.9
2,393,304	-				-3.8
2,393,324	-				-0.7
2,393,356	+				-1.3
2,393,364	-				-0.1
2,393,373	-				+1.8
2,393,374	-				+1.3
2,393,407	+				+1.2
2,393,415	-				-2.1
2,393,418	+				+1.5
2,393,435	+				+0.5
2,393,435	+				-1.4
2,393,442	-				+0.1
2,393,442	-				-0.9
2,393,443	-				-0.1
2,393,443	-				-1.1
2,393,443	-				+2.9
2,393,447	+				-1.4
2,393,466	-				+1.6
2,393,537	+				+0.9
2,393,544	-				+1.9
2,393,584	-				+1.3
2,393,584	-				+0.9
2,393,584	-				-1.1
2,393,592	+		Synpcc7942_2326	0.11	+1.6
2,393,611	+		Synpcc7942_2326	0.14	+0.9
2,393,614	-		Synpcc7942_2326	0.14	-1.7
2,393,787	+		Synpcc7942_2326	0.37	-2.8
2,393,854	-		Synpcc7942_2326	0.46	+2.4
2,393,856	+		Synpcc7942_2326	0.46	-0.1
2,393,872	-		Synpcc7942_2326	0.48	+2.8
2,393,897	-		Synpcc7942_2326	0.52	-0.1
2,393,900	+		Synpcc7942_2326	0.52	-2.4
2,393,900	+		Synpcc7942_2326	0.52	-1.5
2,393,900	+		Synpcc7942_2326	0.52	-0.1
2,393,908	-		Synpcc7942_2326	0.53	+0.9
2,393,908	-		Synpcc7942_2326	0.53	+4.6
2,393,913	-		Synpcc7942_2326	0.54	-0.2
2,393,922	+		Synpcc7942_2326	0.55	+1.2
2,393,967	+		Synpcc7942_2326	0.61	-0.3
2,393,967	+		Synpcc7942_2326	0.61	+0.6
2,393,975	-		Synpcc7942_2326	0.62	+3.0
2,393,975	-		Synpcc7942_2326	0.62	+1.5
2,393,975	-		Synpcc7942_2326	0.62	+0.8
2,393,975	-		Synpcc7942_2326	0.62	+1.5
2,393,976	-		Synpcc7942_2326	0.62	+3.1
2,393,976	-		Synpcc7942_2326	0.62	+2.9
2,393,977	-		Synpcc7942_2326	0.62	-2.7
2,393,977	-		Synpcc7942_2326	0.62	-1.4
2,394,006	+		Synpcc7942_2326	0.66	-0.1
2,394,007	+		Synpcc7942_2326	0.66	+0.8
2,394,014	+		Synpcc7942_2326	0.67	-1.7
2,394,014	-		Synpcc7942_2326	0.67	+0.5
2,394,015	-		Synpcc7942_2326	0.67	+1.4
2,394,015	-		Synpcc7942_2326	0.67	-0.1
2,394,057	+		Synpcc7942_2326	0.73	+2.8
2,394,057	+		Synpcc7942_2326	0.73	+0.3
2,394,060	+				+2.5
2,394,112	-		Synpcc7942_2326	0.80	-1.9
2,394,325	-				-1.4
2,394,722	+				-0.7
2,394,823	+				-1.1
2,394,906	+				-0.5
2,394,914	-				-2.3
2,394,929	+				-1.1
2,394,929	+				+2.2
2,394,929	-				-0.7
2,394,965	+		Synpcc7942_2328	0.12	-0.4
2,394,967	+		Synpcc7942_2328	0.12	-1.7
2,394,968	-		Synpcc7942_2328	0.12	+1.5
2,394,989	+		Synpcc7942_2328	0.14	-0.3
2,394,989	+		Synpcc7942_2328	0.14	+1.9
2,394,989	+		Synpcc7942_2328	0.14	-1.4
2,394,989	+		Synpcc7942_2328	0.14	-1.1
2,394,991	+		Synpcc7942_2328	0.14	+0.9
2,394,997	-		Synpcc7942_2328	0.15	-0.8
2,394,997	-		Synpcc7942_2328	0.15	-1.0
2,394,997	-		Synpcc7942_2328	0.15	-0.1
2,394,997	-		Synpcc7942_2328	0.15	-1.4
2,395,021	+		Synpcc7942_2328	0.17	+1.5
2,395,053	+		Synpcc7942_2328	0.20	-0.1
2,395,061	-		Synpcc7942_2328	0.21	-0.1
2,395,061	-				-1.1
2,395,085	+		Synpcc7942_2328	0.23	+3.9
2,395,097	+		Synpcc7942_2328	0.24	+1.5
2,395,149	+		Synpcc7942_2328	0.29	+1.6
2,395,157	-		Synpcc7942_2328	0.29	+0.9
2,395,157	-		Synpcc7942_2328	0.29	+0.6
2,395,157	-		Synpcc7942_2328	0.29	+1.4
2,395,162	-		Synpcc7942_2328	0.30	-0.7
2,395,229	+		Synpcc7942_2328	0.36	-2.3
2,395,234	+		Synpcc7942_2328	0.36	+0.8
2,395,237	-		Synpcc7942_2328	0.37	+0.9
2,395,237	-		Synpcc7942_2328	0.37	-1.9
2,395,237	-		Synpcc7942_2328	0.37	+3.6
2,395,237	-		Synpcc7942_2328	0.37	+0.3
2,395,237	-		Synpcc7942_2328	0.37	+2.9
2,395,237	-		Synpcc7942_2328	0.37	+1.0
2,395,251	+		Synpcc7942_2328	0.38	-1.1
2,395,259	-		Synpcc7942_2328	0.39	-1.9
2,395,259	-		Synpcc7942_2328	0.39	+3.6