Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2272

Experiment: Cephalothin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.00390625 mg/ml
2,338,664	-		Synpcc7942_2270	0.67	-0.1
2,338,664	-		Synpcc7942_2270	0.67	+2.5
2,338,691	+		Synpcc7942_2270	0.69	+2.1
2,338,707	-		Synpcc7942_2270	0.71	-0.1
2,338,718	-		Synpcc7942_2270	0.72	+0.6
2,338,739	-		Synpcc7942_2270	0.74	+0.9
2,338,741	+		Synpcc7942_2270	0.74	+0.1
2,338,748	+		Synpcc7942_2270	0.75	-0.1
2,338,754	+		Synpcc7942_2270	0.75	-2.1
2,338,758	+		Synpcc7942_2270	0.76	+1.1
2,338,806	-		Synpcc7942_2270	0.80	-0.7
2,338,807	+		Synpcc7942_2270	0.81	-0.4
2,338,838	-		Synpcc7942_2270	0.84	+1.6
2,338,844	+		Synpcc7942_2270	0.84	+0.6
2,338,844	+		Synpcc7942_2270	0.84	+0.9
2,338,844	+		Synpcc7942_2270	0.84	+2.7
2,338,865	-				+3.1
2,338,881	+		Synpcc7942_2270	0.88	-0.1
2,338,881	+		Synpcc7942_2270	0.88	+0.6
2,338,881	+		Synpcc7942_2270	0.88	+3.4
2,338,884	-		Synpcc7942_2270	0.88	-3.2
2,338,889	+		Synpcc7942_2270	0.89	+0.9
2,338,889	-		Synpcc7942_2270	0.89	+0.2
2,338,889	-		Synpcc7942_2270	0.89	-0.1
2,338,889	-		Synpcc7942_2270	0.89	-1.1
2,338,894	-		Synpcc7942_2270	0.89	-1.6
2,338,894	-		Synpcc7942_2270	0.89	+1.8
2,338,899	-		Synpcc7942_2270	0.89	+1.6
2,338,899	-		Synpcc7942_2270	0.89	+0.9
2,338,922	-				+1.3
2,338,941	+				+1.7
2,338,941	+				-0.2
2,338,941	+				-1.7
2,338,941	+				-2.6
2,338,946	+				+0.9
2,338,949	-				+4.2
2,339,026	+				+3.4
2,339,027	-				-0.9
2,339,034	-				-0.1
2,339,061	-				+0.9
2,339,068	-				+1.5
2,339,113	-		Synpcc7942_2271	0.12	-0.3
2,339,146	-		Synpcc7942_2271	0.18	-0.1
2,339,146	-		Synpcc7942_2271	0.18	-1.6
2,339,148	-		Synpcc7942_2271	0.19	-1.3
2,339,169	-				+0.9
2,339,205	-		Synpcc7942_2271	0.29	+0.4
2,339,207	+		Synpcc7942_2271	0.29	-1.4
2,339,250	-		Synpcc7942_2271	0.37	+1.3
2,339,250	-		Synpcc7942_2271	0.37	+1.9
2,339,251	+		Synpcc7942_2271	0.37	-1.9
2,339,279	+		Synpcc7942_2271	0.42	-1.3
2,339,287	-		Synpcc7942_2271	0.44	-0.1
2,339,362	-		Synpcc7942_2271	0.57	-0.2
2,339,433	-		Synpcc7942_2271	0.70	+2.6
2,339,453	+		Synpcc7942_2271	0.74	-2.1
2,339,461	-		Synpcc7942_2271	0.75	-2.3
2,339,524	-		Synpcc7942_2271	0.87	+0.1
2,339,550	+				-2.1
2,339,556	+				-2.0
2,339,594	-				-2.4
2,339,594	-				-0.2
2,339,602	+				-1.7
2,339,611	-				+1.5
2,339,629	-				+1.3
2,340,138	+				-0.1
2,340,153	+				-1.4
2,340,181	+				+1.6
2,340,213	-				+0.5
2,340,229	+				+2.8
2,340,229	+				+0.9
2,340,250	+		Synpcc7942_2273	0.13	+2.9
2,340,258	-		Synpcc7942_2273	0.14	-0.7
2,340,258	-		Synpcc7942_2273	0.14	+0.9
2,340,262	+		Synpcc7942_2273	0.14	+2.0
2,340,262	+		Synpcc7942_2273	0.14	-0.9
2,340,270	-		Synpcc7942_2273	0.15	+1.7
2,340,272	+		Synpcc7942_2273	0.15	+0.9
2,340,273	+		Synpcc7942_2273	0.16	+0.9
2,340,278	+		Synpcc7942_2273	0.16	+0.4
2,340,287	-		Synpcc7942_2273	0.17	-1.9
2,340,317	+		Synpcc7942_2273	0.21	+1.5
2,340,318	+		Synpcc7942_2273	0.21	+0.1
2,340,326	-		Synpcc7942_2273	0.23	-0.7
2,340,337	+		Synpcc7942_2273	0.24	+2.0
2,340,341	+		Synpcc7942_2273	0.24	-1.4
2,340,397	+		Synpcc7942_2273	0.32	-0.1
2,340,416	+		Synpcc7942_2273	0.34	-0.1
2,340,424	-		Synpcc7942_2273	0.35	+0.3
2,340,473	-		Synpcc7942_2273	0.42	-1.1
2,340,473	-				-0.1
2,340,481	-		Synpcc7942_2273	0.43	+2.5
2,340,489	+		Synpcc7942_2273	0.44	-0.1
2,340,499	+		Synpcc7942_2273	0.45	+0.9
2,340,504	+		Synpcc7942_2273	0.46	-1.4
2,340,543	+		Synpcc7942_2273	0.51	-1.3
2,340,543	+		Synpcc7942_2273	0.51	-1.9
2,340,543	+		Synpcc7942_2273	0.51	+1.7
2,340,551	-		Synpcc7942_2273	0.52	-1.1
2,340,551	-		Synpcc7942_2273	0.52	-1.4
2,340,551	-		Synpcc7942_2273	0.52	+1.0
2,340,551	-		Synpcc7942_2273	0.52	+1.1
2,340,552	+		Synpcc7942_2273	0.52	-0.1
2,340,558	-		Synpcc7942_2273	0.53	-1.1
2,340,591	+		Synpcc7942_2273	0.57	+0.4
2,340,610	-		Synpcc7942_2273	0.60	-0.7
2,340,620	+		Synpcc7942_2273	0.61	+3.1
2,340,625	+		Synpcc7942_2273	0.61	+1.2
2,340,628	-		Synpcc7942_2273	0.62	+2.0
2,340,633	-		Synpcc7942_2273	0.62	-2.1
2,340,635	+				-0.1
2,340,635	-		Synpcc7942_2273	0.63	-0.7
2,340,641	-		Synpcc7942_2273	0.64	-1.9
2,340,664	-		Synpcc7942_2273	0.67	-0.9
2,340,677	+		Synpcc7942_2273	0.68	-1.9
2,340,689	+		Synpcc7942_2273	0.70	+1.3
2,340,700	+		Synpcc7942_2273	0.71	-1.9
2,340,729	+		Synpcc7942_2273	0.75	-1.7
2,340,746	+		Synpcc7942_2273	0.77	+0.9
2,340,771	+		Synpcc7942_2273	0.80	+1.7
2,340,778	-		Synpcc7942_2273	0.81	+0.9
2,340,784	-		Synpcc7942_2273	0.82	+2.4
2,340,799	-		Synpcc7942_2273	0.84	-1.4
2,340,824	+		Synpcc7942_2273	0.87	+0.9
2,340,832	+		Synpcc7942_2273	0.88	-0.1
2,340,832	+		Synpcc7942_2273	0.88	-2.1
2,340,833	-				+0.9
2,340,840	-		Synpcc7942_2273	0.89	-0.1
2,340,840	-		Synpcc7942_2273	0.89	-1.2
2,340,840	-		Synpcc7942_2273	0.89	+2.7
2,340,851	+				+0.9
2,340,867	+				+1.2
2,340,870	-				-0.7
2,340,875	-				-0.1
2,340,876	-				-1.1
2,340,955	-				-1.7
2,340,970	-				-2.7