Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2167

Experiment: Cephalothin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.00390625 mg/ml
2,247,045	-				+1.6
2,247,081	+		Synpcc7942_2165	0.24	+0.8
2,247,087	+		Synpcc7942_2165	0.26	+2.1
2,247,094	+		Synpcc7942_2165	0.28	-1.1
2,247,094	+		Synpcc7942_2165	0.28	-1.7
2,247,094	+		Synpcc7942_2165	0.28	+0.9
2,247,094	+		Synpcc7942_2165	0.28	-0.1
2,247,102	-		Synpcc7942_2165	0.30	-1.1
2,247,102	-		Synpcc7942_2165	0.30	+0.4
2,247,102	-		Synpcc7942_2165	0.30	-1.9
2,247,102	-		Synpcc7942_2165	0.30	+1.7
2,247,182	-		Synpcc7942_2165	0.51	+1.6
2,247,193	+		Synpcc7942_2165	0.54	+0.8
2,247,193	-		Synpcc7942_2165	0.54	-2.1
2,247,193	-		Synpcc7942_2165	0.54	-0.7
2,247,203	-		Synpcc7942_2165	0.56	-2.4
2,247,216	+		Synpcc7942_2165	0.60	+0.4
2,247,224	-		Synpcc7942_2165	0.62	+1.9
2,247,226	+		Synpcc7942_2165	0.62	-1.3
2,247,233	+		Synpcc7942_2165	0.64	-0.1
2,247,240	+		Synpcc7942_2165	0.66	+2.5
2,247,248	-		Synpcc7942_2165	0.68	+0.2
2,247,248	-		Synpcc7942_2165	0.68	+0.6
2,247,248	-		Synpcc7942_2165	0.68	+1.2
2,247,270	-		Synpcc7942_2165	0.74	-1.0
2,247,297	-		Synpcc7942_2165	0.81	-1.7
2,247,307	+		Synpcc7942_2165	0.83	+3.2
2,247,315	-		Synpcc7942_2165	0.86	-0.9
2,247,329	+		Synpcc7942_2165	0.89	-1.1
2,247,331	-		Synpcc7942_2165	0.90	+0.4
2,247,333	+				+1.6
2,247,357	+				+0.9
2,247,365	-				+0.6
2,247,401	+				-3.0
2,247,401	+				+1.2
2,247,409	-				-0.7
2,247,409	-				+0.3
2,247,409	-				-1.7
2,247,413	+				-0.4
2,247,413	+				-1.9
2,247,421	-				-0.4
2,247,421	-				-0.7
2,247,421	-				-3.3
2,247,421	-				-0.1
2,247,421	-				-1.4
2,247,431	-				-3.6
2,247,468	+				-0.1
2,247,469	+				-0.7
2,247,494	-				-2.4
2,247,567	+		Synpcc7942_2166	0.22	+1.1
2,247,567	+		Synpcc7942_2166	0.22	+2.3
2,247,567	+		Synpcc7942_2166	0.22	+0.8
2,247,567	+				-0.1
2,247,575	-		Synpcc7942_2166	0.24	-1.2
2,247,575	-		Synpcc7942_2166	0.24	+3.1
2,247,575	-		Synpcc7942_2166	0.24	-0.4
2,247,575	-		Synpcc7942_2166	0.24	+1.2
2,247,581	-		Synpcc7942_2166	0.26	-2.3
2,247,602	-		Synpcc7942_2166	0.31	-0.1
2,247,609	+		Synpcc7942_2166	0.33	-1.1
2,247,615	+				+0.9
2,247,623	+		Synpcc7942_2166	0.37	-3.1
2,247,623	+		Synpcc7942_2166	0.37	-1.4
2,247,623	+		Synpcc7942_2166	0.37	+1.9
2,247,631	-		Synpcc7942_2166	0.39	-1.9
2,247,631	-		Synpcc7942_2166	0.39	-0.2
2,247,631	-		Synpcc7942_2166	0.39	+3.4
2,247,653	-		Synpcc7942_2166	0.45	-0.7
2,247,655	+		Synpcc7942_2166	0.45	+3.1
2,247,663	-		Synpcc7942_2166	0.48	-0.7
2,247,719	-		Synpcc7942_2166	0.63	-0.9
2,247,728	-		Synpcc7942_2166	0.65	+3.9
2,247,730	+		Synpcc7942_2166	0.66	-1.4
2,247,730	+		Synpcc7942_2166	0.66	-2.6
2,247,730	+		Synpcc7942_2166	0.66	+1.6
2,247,730	+		Synpcc7942_2166	0.66	+3.5
2,247,730	+		Synpcc7942_2166	0.66	-2.1
2,247,730	+		Synpcc7942_2166	0.66	+0.5
2,247,738	+		Synpcc7942_2166	0.68	-0.1
2,247,738	-		Synpcc7942_2166	0.68	-0.8
2,247,738	-		Synpcc7942_2166	0.68	+2.3
2,247,738	-		Synpcc7942_2166	0.68	-2.3
2,247,738	-		Synpcc7942_2166	0.68	+1.6
2,247,738	-		Synpcc7942_2166	0.68	-1.3
2,247,738	-		Synpcc7942_2166	0.68	-1.4
2,247,738	-		Synpcc7942_2166	0.68	+1.2
2,247,739	+				-0.1
2,247,739	+		Synpcc7942_2166	0.68	-3.0
2,247,745	-		Synpcc7942_2166	0.70	+2.9
2,247,746	-		Synpcc7942_2166	0.70	-1.9
2,247,747	-		Synpcc7942_2166	0.70	-2.3
2,247,763	+		Synpcc7942_2166	0.74	-1.4
2,247,765	+		Synpcc7942_2166	0.75	-1.9
2,247,768	-		Synpcc7942_2166	0.76	-1.9
2,247,771	-		Synpcc7942_2166	0.77	+0.3
2,247,804	+		Synpcc7942_2166	0.85	+1.9
2,247,805	+		Synpcc7942_2166	0.86	-2.6
2,247,809	+		Synpcc7942_2166	0.87	+1.1
2,247,869	-				+1.9
2,247,873	-				+0.5
2,247,874	-				-2.1
2,247,879	+				-0.9
2,247,899	+				-1.4
2,247,902	-				+3.0
2,247,904	-				-1.1
2,247,916	+				+2.6
2,247,916	+				+2.1
2,247,924	-				+1.3
2,247,940	-				+0.5
2,247,940	-				+2.6
2,247,952	+				+1.6
2,247,952	+				+1.1
2,247,952	+				-2.9
2,247,974	-				-0.7
2,247,984	-				+0.9
2,247,986	+				-3.0
2,247,986	+				+0.4
2,248,023	+				-3.1
2,248,102	+		Synpcc7942_2167	0.19	+4.2
2,248,102	+		Synpcc7942_2167	0.19	-0.8
2,248,132	+		Synpcc7942_2167	0.26	+2.4
2,248,135	-		Synpcc7942_2167	0.26	-1.4
2,248,140	-		Synpcc7942_2167	0.27	+1.0
2,248,156	+		Synpcc7942_2167	0.31	-0.7
2,248,163	+		Synpcc7942_2167	0.32	-1.1
2,248,205	-		Synpcc7942_2167	0.42	+3.5
2,248,209	+		Synpcc7942_2167	0.43	-1.9
2,248,212	-				-0.7
2,248,224	-		Synpcc7942_2167	0.46	+2.4
2,248,226	+		Synpcc7942_2167	0.46	-0.7
2,248,276	+		Synpcc7942_2167	0.57	+2.9
2,248,284	-		Synpcc7942_2167	0.59	-3.1
2,248,305	+		Synpcc7942_2167	0.64	+0.9
2,248,352	+		Synpcc7942_2167	0.74	-2.1
2,248,362	+		Synpcc7942_2167	0.76	+1.8
2,248,362	-		Synpcc7942_2167	0.76	+0.1
2,248,369	-		Synpcc7942_2167	0.78	-2.1
2,248,370	-		Synpcc7942_2167	0.78	-1.4
2,248,370	-		Synpcc7942_2167	0.78	+1.2
2,248,371	+		Synpcc7942_2167	0.78	-1.4
2,248,371	+		Synpcc7942_2167	0.78	-1.9
2,248,376	+		Synpcc7942_2167	0.79	-0.7
2,248,376	+		Synpcc7942_2167	0.79	-3.3
2,248,376	+		Synpcc7942_2167	0.79	-1.3
2,248,379	-		Synpcc7942_2167	0.80	-1.3
2,248,399	+		Synpcc7942_2167	0.85	+4.1
2,248,399	+		Synpcc7942_2167	0.85	-1.7
2,248,407	-		Synpcc7942_2167	0.86	+2.5
2,248,445	-				+4.5
2,248,523	+				+0.9
2,248,528	+				+1.2
2,248,550	-				+4.8
2,248,593	-				-1.9
2,248,598	+				+1.1
2,248,599	+				-0.7
2,248,604	+				+0.9
2,248,612	-				+3.9
2,248,620	+				-0.7
2,248,632	+				-0.4
2,248,633	-				-1.4
2,248,650	+				-0.1
2,248,653	+				-0.1
2,248,704	+				+1.0
2,248,712	-				-2.6