Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2161

Experiment: Cephalothin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.00390625 mg/ml
2,242,901	-	nhtA	Synpcc7942_2160	0.16	-0.9
2,242,971	-				-1.1
2,242,993	-	nhtA	Synpcc7942_2160	0.24	-2.1
2,243,097	-	nhtA	Synpcc7942_2160	0.33	-0.7
2,243,120	-	nhtA	Synpcc7942_2160	0.35	-0.4
2,243,153	-	nhtA	Synpcc7942_2160	0.38	-0.1
2,243,202	+	nhtA	Synpcc7942_2160	0.42	+0.7
2,243,210	-	nhtA	Synpcc7942_2160	0.43	-0.7
2,243,462	+	nhtA	Synpcc7942_2160	0.65	-1.5
2,243,669	-	nhtA	Synpcc7942_2160	0.83	+0.0
2,243,855	+				+0.1
2,243,855	-				+0.9
2,243,869	-				-1.4
2,243,871	+				+0.9
2,243,937	-				+2.6
2,243,949	-		Synpcc7942_2161	0.11	-1.9
2,243,985	+		Synpcc7942_2161	0.16	-1.0
2,244,069	-		Synpcc7942_2161	0.29	-2.0
2,244,196	-		Synpcc7942_2161	0.48	-2.1
2,244,201	-		Synpcc7942_2161	0.49	+4.6
2,244,201	-		Synpcc7942_2161	0.49	+2.6
2,244,201	-		Synpcc7942_2161	0.49	-1.1
2,244,210	+		Synpcc7942_2161	0.50	-0.7
2,244,395	+		Synpcc7942_2161	0.78	+4.8
2,244,431	+		Synpcc7942_2161	0.84	-0.4
2,244,431	+		Synpcc7942_2161	0.84	+0.1
2,244,431	+		Synpcc7942_2161	0.84	-1.4
2,244,478	+				+0.9
2,244,682	-				+0.8
2,244,682	-				-0.1
2,244,716	+				-0.1
2,244,740	+				-0.7
2,244,764	-		Synpcc7942_2162	0.18	-0.6
2,244,787	-		Synpcc7942_2162	0.29	-1.4
2,244,804	-		Synpcc7942_2162	0.37	-0.1
2,244,836	+		Synpcc7942_2162	0.51	-1.7
2,244,839	-		Synpcc7942_2162	0.53	-2.9
2,244,839	-		Synpcc7942_2162	0.53	+1.7
2,244,844	-		Synpcc7942_2162	0.55	-1.1
2,244,875	-		Synpcc7942_2162	0.69	+0.4
2,244,923	-				-1.6
2,244,923	-				+0.9
2,244,925	+				-0.3
2,244,925	+				-2.1
2,244,967	+				-1.7
2,244,975	-				-2.6
2,245,000	+				-1.9
2,245,033	+				-0.1
2,245,033	+				+3.6
2,245,033	+				+3.2
2,245,040	+				+1.8
2,245,041	-				+0.9
2,245,078	+				-0.7
2,245,092	-		Synpcc7942_2163	0.11	-1.1
2,245,125	-		Synpcc7942_2163	0.18	+1.3
2,245,139	+		Synpcc7942_2163	0.21	-1.4
2,245,140	-		Synpcc7942_2163	0.21	+1.9
2,245,147	-		Synpcc7942_2163	0.22	-1.7
2,245,147	-		Synpcc7942_2163	0.22	+1.2
2,245,163	-		Synpcc7942_2163	0.26	+1.3
2,245,185	+		Synpcc7942_2163	0.30	+0.3
2,245,210	+		Synpcc7942_2163	0.35	+4.1
2,245,266	+		Synpcc7942_2163	0.47	-1.9
2,245,295	+		Synpcc7942_2163	0.53	-0.7
2,245,308	-				+0.9
2,245,318	-		Synpcc7942_2163	0.57	+2.5
2,245,319	-		Synpcc7942_2163	0.58	-0.0
2,245,326	-		Synpcc7942_2163	0.59	+1.0
2,245,329	-		Synpcc7942_2163	0.60	-1.4
2,245,346	-		Synpcc7942_2163	0.63	-0.7
2,245,383	+		Synpcc7942_2163	0.71	+2.1
2,245,393	+		Synpcc7942_2163	0.73	-1.7
2,245,393	+		Synpcc7942_2163	0.73	+1.0
2,245,393	+		Synpcc7942_2163	0.73	-0.7
2,245,393	+		Synpcc7942_2163	0.73	-0.1
2,245,401	-		Synpcc7942_2163	0.74	-0.1
2,245,401	-		Synpcc7942_2163	0.74	-1.1
2,245,401	-		Synpcc7942_2163	0.74	+1.8
2,245,401	-		Synpcc7942_2163	0.74	+4.1
2,245,401	-		Synpcc7942_2163	0.74	-1.4
2,245,410	+		Synpcc7942_2163	0.76	-1.7
2,245,421	-		Synpcc7942_2163	0.79	-2.3
2,245,423	+		Synpcc7942_2163	0.79	+4.4
2,245,453	+		Synpcc7942_2163	0.85	+3.2
2,245,516	-				+4.8
2,245,520	+				-1.7
2,245,530	+				-0.1
2,245,530	+				-1.9
2,245,530	+				+0.7
2,245,530	+				+0.9
2,245,530	+				-0.7
2,245,530	+				+1.5