Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1641

Experiment: Cephalothin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.00390625 mg/ml
1,707,756	-				-0.1
1,707,784	+				+0.5
1,707,792	-				+0.6
1,707,837	-				+0.9
1,707,877	+				-1.7
1,707,879	-				+0.5
1,707,882	+				-1.7
1,707,885	-				+3.7
1,707,887	+				-1.1
1,707,967	-		Synpcc7942_1640	0.16	-0.1
1,707,983	-		Synpcc7942_1640	0.19	-0.1
1,707,988	-		Synpcc7942_1640	0.20	-0.7
1,707,993	-		Synpcc7942_1640	0.21	-1.3
1,708,013	+		Synpcc7942_1640	0.25	+0.5
1,708,022	+		Synpcc7942_1640	0.26	-2.6
1,708,076	+		Synpcc7942_1640	0.37	-1.4
1,708,086	-		Synpcc7942_1640	0.38	+0.4
1,708,135	-		Synpcc7942_1640	0.48	-2.1
1,708,142	+		Synpcc7942_1640	0.49	-0.1
1,708,150	-		Synpcc7942_1640	0.50	+0.9
1,708,152	+		Synpcc7942_1640	0.51	-0.1
1,708,181	+		Synpcc7942_1640	0.56	-0.7
1,708,232	+		Synpcc7942_1640	0.66	-2.7
1,708,255	+		Synpcc7942_1640	0.70	+2.2
1,708,263	+		Synpcc7942_1640	0.72	+6.1
1,708,263	-		Synpcc7942_1640	0.72	-0.8
1,708,271	-		Synpcc7942_1640	0.73	-1.4
1,708,283	+		Synpcc7942_1640	0.75	+1.1
1,708,319	+		Synpcc7942_1640	0.82	-1.7
1,708,320	-		Synpcc7942_1640	0.82	-0.7
1,708,327	-		Synpcc7942_1640	0.84	-1.9
1,708,343	+		Synpcc7942_1640	0.87	+1.6
1,708,350	-		Synpcc7942_1640	0.88	-1.9
1,708,408	+				+1.4
1,708,408	+				-1.1
1,708,416	-				+0.6
1,708,444	+				+0.9
1,708,472	-				-0.1
1,708,484	-				+1.4
1,708,485	-				-0.7
1,708,487	+				+3.0
1,708,490	-				+1.5
1,708,495	-				-0.1
1,708,495	-				-0.1
1,708,596	+				-0.1
1,708,602	+				+0.3
1,708,602	+				-0.1
1,708,602	+				+1.3
1,708,605	-				-2.3
1,708,676	+				+2.2
1,708,698	+				-0.7
1,708,708	+				+3.6
1,708,713	+				+3.6
1,708,723	+		Synpcc7942_1641	0.12	-1.4
1,708,730	+		Synpcc7942_1641	0.13	+3.4
1,708,730	+		Synpcc7942_1641	0.13	+1.2
1,708,730	+		Synpcc7942_1641	0.13	+2.4
1,708,730	+		Synpcc7942_1641	0.13	-1.1
1,708,730	+		Synpcc7942_1641	0.13	+3.1
1,708,730	+		Synpcc7942_1641	0.13	+1.7
1,708,730	+		Synpcc7942_1641	0.13	+1.2
1,708,738	-		Synpcc7942_1641	0.15	+2.5
1,708,738	-		Synpcc7942_1641	0.15	-1.7
1,708,738	-		Synpcc7942_1641	0.15	+1.2
1,708,738	-		Synpcc7942_1641	0.15	-1.1
1,708,766	-		Synpcc7942_1641	0.20	+2.4
1,708,794	+		Synpcc7942_1641	0.26	+3.2
1,708,797	-		Synpcc7942_1641	0.26	+4.2
1,708,816	+		Synpcc7942_1641	0.30	+1.3
1,708,826	+		Synpcc7942_1641	0.32	+5.5
1,708,892	-		Synpcc7942_1641	0.45	+1.6
1,708,909	+		Synpcc7942_1641	0.49	+1.4
1,708,917	-		Synpcc7942_1641	0.50	-1.1
1,708,945	+		Synpcc7942_1641	0.56	+1.6
1,708,952	-		Synpcc7942_1641	0.57	+2.1
1,708,952	-		Synpcc7942_1641	0.57	-0.3
1,708,962	-		Synpcc7942_1641	0.59	-1.4
1,708,971	-		Synpcc7942_1641	0.61	+1.6
1,708,995	+		Synpcc7942_1641	0.66	+3.0
1,708,995	+		Synpcc7942_1641	0.66	+0.8
1,708,995	+		Synpcc7942_1641	0.66	+1.5
1,708,995	+		Synpcc7942_1641	0.66	+3.3
1,708,995	+		Synpcc7942_1641	0.66	+0.9
1,708,995	+		Synpcc7942_1641	0.66	+2.9
1,708,995	+		Synpcc7942_1641	0.66	+0.5
1,708,995	+		Synpcc7942_1641	0.66	+4.4
1,709,003	-		Synpcc7942_1641	0.67	-0.1
1,709,003	-		Synpcc7942_1641	0.67	+1.3
1,709,003	-		Synpcc7942_1641	0.67	+1.4
1,709,003	-		Synpcc7942_1641	0.67	-0.1
1,709,013	-		Synpcc7942_1641	0.69	-1.4
1,709,037	-		Synpcc7942_1641	0.74	+0.1
1,709,064	-		Synpcc7942_1641	0.80	-1.4
1,709,135	-				+2.5
1,709,146	+				-1.4
1,709,154	-				-0.1
1,709,188	+				+0.9
1,709,188	+				+0.5
1,709,198	+				+1.4
1,709,239	-				-1.1
1,709,248	+				+3.8
1,709,248	+				-0.1
1,709,269	+				+0.2
1,709,276	+				-0.7
1,709,516	+		Synpcc7942_1642	0.31	+1.6
1,709,526	+		Synpcc7942_1642	0.32	+0.6
1,709,529	+		Synpcc7942_1642	0.33	+0.9
1,709,531	+		Synpcc7942_1642	0.33	-0.7
1,709,531	+		Synpcc7942_1642	0.33	+0.9
1,709,537	-		Synpcc7942_1642	0.33	-1.1
1,709,537	-		Synpcc7942_1642	0.33	-2.4
1,709,539	-		Synpcc7942_1642	0.34	+2.8
1,709,539	-		Synpcc7942_1642	0.34	-1.0
1,709,541	+		Synpcc7942_1642	0.34	+2.1
1,709,541	+		Synpcc7942_1642	0.34	-3.0
1,709,547	-		Synpcc7942_1642	0.34	-2.1
1,709,570	+		Synpcc7942_1642	0.36	+3.2
1,709,578	-		Synpcc7942_1642	0.37	+0.6
1,709,578	-		Synpcc7942_1642	0.37	+0.9
1,709,588	-		Synpcc7942_1642	0.38	-2.0
1,709,661	+		Synpcc7942_1642	0.45	+1.5
1,709,668	-		Synpcc7942_1642	0.46	-2.4
1,709,675	-		Synpcc7942_1642	0.46	+1.8
1,709,679	-		Synpcc7942_1642	0.47	-0.1
1,709,702	-		Synpcc7942_1642	0.49	-2.7
1,709,702	-		Synpcc7942_1642	0.49	+2.2
1,709,704	+		Synpcc7942_1642	0.49	+0.9
1,709,704	+		Synpcc7942_1642	0.49	-2.1
1,709,704	+		Synpcc7942_1642	0.49	-0.1
1,709,704	+				+0.9
1,709,726	+		Synpcc7942_1642	0.51	+3.2
1,709,733	-		Synpcc7942_1642	0.52	+2.2
1,709,735	-		Synpcc7942_1642	0.52	-0.7
1,709,841	+		Synpcc7942_1642	0.62	+0.3
1,709,857	-		Synpcc7942_1642	0.63	-2.6
1,709,873	+		Synpcc7942_1642	0.65	+0.6
1,709,874	+		Synpcc7942_1642	0.65	+0.9
1,709,881	-		Synpcc7942_1642	0.65	-2.1
1,709,882	-		Synpcc7942_1642	0.66	-1.9
1,709,883	+		Synpcc7942_1642	0.66	-0.1
1,709,894	+		Synpcc7942_1642	0.67	+1.7
1,709,902	-		Synpcc7942_1642	0.67	+1.3
1,709,902	-		Synpcc7942_1642	0.67	+3.4
1,709,918	+		Synpcc7942_1642	0.69	-1.9
1,709,929	+		Synpcc7942_1642	0.70	+1.4
1,709,929	+		Synpcc7942_1642	0.70	+0.9
1,709,929	+		Synpcc7942_1642	0.70	+1.3
1,709,955	+		Synpcc7942_1642	0.72	+0.5
1,709,961	+		Synpcc7942_1642	0.73	+2.3
1,709,966	-		Synpcc7942_1642	0.73	+1.7
1,710,013	+		Synpcc7942_1642	0.78	+1.2
1,710,018	-		Synpcc7942_1642	0.78	-1.1
1,710,019	+		Synpcc7942_1642	0.78	+0.9
1,710,102	+		Synpcc7942_1642	0.86	-2.1
1,710,135	+		Synpcc7942_1642	0.89	+0.7
1,710,138	-		Synpcc7942_1642	0.89	+0.5
1,710,158	+				-0.1