Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1477

Experiment: Cephalothin 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.00390625 mg/ml
1,527,383	-				-0.6
1,527,383	-				-0.0
1,527,395	+				+1.4
1,527,428	-				+2.2
1,527,438	-				+2.7
1,527,438	-				+3.3
1,527,438	-				+1.4
1,527,438	-				-1.3
1,527,463	+				-2.9
1,527,528	-				-0.6
1,527,534	+				-1.3
1,527,592	+				+2.0
1,527,610	+				+0.5
1,527,626	+				-1.0
1,527,746	-				-0.8
1,527,806	+		Synpcc7942_1476	0.28	-3.5
1,527,807	+		Synpcc7942_1476	0.29	+1.1
1,527,814	-		Synpcc7942_1476	0.31	+1.5
1,527,814	-		Synpcc7942_1476	0.31	+0.5
1,527,826	-		Synpcc7942_1476	0.35	+2.3
1,527,849	-		Synpcc7942_1476	0.42	+0.2
1,527,856	+		Synpcc7942_1476	0.44	-0.6
1,527,856	+		Synpcc7942_1476	0.44	-0.6
1,527,881	+		Synpcc7942_1476	0.52	-1.5
1,527,992	-		Synpcc7942_1476	0.87	-0.0
1,527,999	+		Synpcc7942_1476	0.90	+1.6
1,528,016	-				-1.0
1,528,046	+				+1.5
1,528,054	-				-1.6
1,528,054	-				-1.3
1,528,061	-				+2.4
1,528,083	-				+3.4
1,528,112	-				+1.0
1,528,114	+				+0.8
1,528,117	-				+1.0
1,528,122	-				-2.6
1,528,141	-				+0.8
1,528,146	-				-2.2
1,528,193	+				+3.2
1,528,201	-				-0.0
1,528,201	-				-1.5
1,528,253	+				-1.3
1,528,261	-				-2.5
1,528,312	+				+0.8
1,528,325	-				+0.9
1,528,331	+				-0.2
1,528,399	+		Synpcc7942_1477	0.12	+1.0
1,528,400	+		Synpcc7942_1477	0.12	-1.8
1,528,407	-		Synpcc7942_1477	0.12	-0.0
1,528,425	+		Synpcc7942_1477	0.13	-0.0
1,528,433	-		Synpcc7942_1477	0.13	+2.2
1,528,497	-		Synpcc7942_1477	0.16	-0.8
1,528,502	-		Synpcc7942_1477	0.16	-1.4
1,528,532	-		Synpcc7942_1477	0.18	+1.9
1,528,581	+		Synpcc7942_1477	0.20	-1.6
1,528,599	-		Synpcc7942_1477	0.21	-2.7
1,528,621	+		Synpcc7942_1477	0.22	+1.9
1,528,627	-		Synpcc7942_1477	0.22	+2.2
1,528,629	-		Synpcc7942_1477	0.22	-1.4
1,528,629	-		Synpcc7942_1477	0.22	+3.6
1,528,629	-		Synpcc7942_1477	0.22	-1.8
1,528,631	+		Synpcc7942_1477	0.22	+0.6
1,528,639	-		Synpcc7942_1477	0.23	+1.0
1,528,641	-		Synpcc7942_1477	0.23	+1.0
1,528,659	-		Synpcc7942_1477	0.24	+1.6
1,528,740	+		Synpcc7942_1477	0.27	-0.0
1,528,742	+		Synpcc7942_1477	0.27	+3.6
1,528,748	-		Synpcc7942_1477	0.28	-0.0
1,528,748	-		Synpcc7942_1477	0.28	+0.7
1,528,751	+		Synpcc7942_1477	0.28	-1.6
1,528,759	-		Synpcc7942_1477	0.28	-0.4
1,528,759	-		Synpcc7942_1477	0.28	-3.0
1,528,761	-		Synpcc7942_1477	0.28	-1.6
1,528,771	-		Synpcc7942_1477	0.29	-0.3
1,528,791	-		Synpcc7942_1477	0.30	-0.5
1,528,810	+		Synpcc7942_1477	0.30	+2.1
1,528,826	+		Synpcc7942_1477	0.31	+2.2
1,528,859	-		Synpcc7942_1477	0.33	-0.4
1,528,909	+		Synpcc7942_1477	0.35	+1.1
1,528,943	-		Synpcc7942_1477	0.36	+0.2
1,528,944	-		Synpcc7942_1477	0.37	+2.0
1,528,944	-		Synpcc7942_1477	0.37	+1.6
1,528,947	+		Synpcc7942_1477	0.37	-1.3
1,528,954	+		Synpcc7942_1477	0.37	-0.0
1,528,955	-		Synpcc7942_1477	0.37	+0.8
1,528,955	-		Synpcc7942_1477	0.37	+1.0
1,528,959	+		Synpcc7942_1477	0.37	+1.9
1,528,975	+		Synpcc7942_1477	0.38	+1.6
1,528,979	+		Synpcc7942_1477	0.38	-3.8
1,529,004	-		Synpcc7942_1477	0.39	+2.4
1,529,018	+		Synpcc7942_1477	0.40	-0.6
1,529,039	+		Synpcc7942_1477	0.41	+1.0
1,529,039	+		Synpcc7942_1477	0.41	+1.0
1,529,047	-		Synpcc7942_1477	0.41	-0.6
1,529,086	+		Synpcc7942_1477	0.43	-1.6
1,529,093	+		Synpcc7942_1477	0.43	-2.9
1,529,094	-		Synpcc7942_1477	0.43	+2.1
1,529,094	-		Synpcc7942_1477	0.43	+0.7
1,529,098	+		Synpcc7942_1477	0.44	-0.4
1,529,099	+		Synpcc7942_1477	0.44	+2.3
1,529,126	+		Synpcc7942_1477	0.45	-0.0
1,529,180	+		Synpcc7942_1477	0.47	-2.3
1,529,181	+		Synpcc7942_1477	0.47	-0.6
1,529,189	-		Synpcc7942_1477	0.48	+1.1
1,529,189	-		Synpcc7942_1477	0.48	-2.2
1,529,191	+		Synpcc7942_1477	0.48	-0.6
1,529,199	-		Synpcc7942_1477	0.48	-1.8
1,529,222	+		Synpcc7942_1477	0.49	+1.2
1,529,227	+		Synpcc7942_1477	0.49	-2.8
1,529,248	+		Synpcc7942_1477	0.50	+1.8
1,529,256	-		Synpcc7942_1477	0.51	-0.6
1,529,258	+		Synpcc7942_1477	0.51	-0.6
1,529,258	+		Synpcc7942_1477	0.51	-2.0
1,529,258	+				+1.0
1,529,258	+		Synpcc7942_1477	0.51	+0.9
1,529,266	-		Synpcc7942_1477	0.51	-0.8
1,529,266	-		Synpcc7942_1477	0.51	+1.1
1,529,266	-		Synpcc7942_1477	0.51	+0.1
1,529,266	-		Synpcc7942_1477	0.51	+2.4
1,529,266	-		Synpcc7942_1477	0.51	-0.7
1,529,276	+		Synpcc7942_1477	0.52	+1.0
1,529,281	+		Synpcc7942_1477	0.52	+1.5
1,529,281	+		Synpcc7942_1477	0.52	+3.1
1,529,283	-		Synpcc7942_1477	0.52	+1.7
1,529,289	-		Synpcc7942_1477	0.52	-0.0
1,529,289	-		Synpcc7942_1477	0.52	-1.8
1,529,289	-		Synpcc7942_1477	0.52	-2.3
1,529,303	-		Synpcc7942_1477	0.53	+4.6
1,529,304	+		Synpcc7942_1477	0.53	+4.2
1,529,347	+		Synpcc7942_1477	0.55	+2.1
1,529,347	+		Synpcc7942_1477	0.55	+2.4
1,529,347	+		Synpcc7942_1477	0.55	-2.0
1,529,347	+		Synpcc7942_1477	0.55	-0.6
1,529,347	+		Synpcc7942_1477	0.55	-0.0
1,529,347	+		Synpcc7942_1477	0.55	-3.1
1,529,347	+		Synpcc7942_1477	0.55	+1.0
1,529,347	+		Synpcc7942_1477	0.55	+2.6
1,529,347	+		Synpcc7942_1477	0.55	-0.0
1,529,347	+		Synpcc7942_1477	0.55	-1.6
1,529,347	+		Synpcc7942_1477	0.55	-1.3
1,529,347	+		Synpcc7942_1477	0.55	+2.8
1,529,350	-		Synpcc7942_1477	0.55	+1.6
1,529,355	-		Synpcc7942_1477	0.55	-2.9
1,529,355	-		Synpcc7942_1477	0.55	-0.6
1,529,355	-		Synpcc7942_1477	0.55	-0.2
1,529,355	-		Synpcc7942_1477	0.55	-2.6
1,529,355	-		Synpcc7942_1477	0.55	+2.2
1,529,355	-		Synpcc7942_1477	0.55	+0.2
1,529,355	-		Synpcc7942_1477	0.55	+1.8
1,529,355	-		Synpcc7942_1477	0.55	-0.3
1,529,355	-		Synpcc7942_1477	0.55	+1.4
1,529,355	-		Synpcc7942_1477	0.55	-1.3
1,529,357	-		Synpcc7942_1477	0.55	+2.1
1,529,372	-		Synpcc7942_1477	0.56	+1.9
1,529,380	+		Synpcc7942_1477	0.56	+1.0
1,529,424	-		Synpcc7942_1477	0.58	+3.6
1,529,428	+		Synpcc7942_1477	0.59	+1.0
1,529,429	-		Synpcc7942_1477	0.59	+0.4
1,529,438	+		Synpcc7942_1477	0.59	-1.2
1,529,463	-		Synpcc7942_1477	0.60	-2.7
1,529,488	+		Synpcc7942_1477	0.61	+2.6
1,529,515	-		Synpcc7942_1477	0.63	-0.6
1,529,523	+		Synpcc7942_1477	0.63	+2.6
1,529,637	-		Synpcc7942_1477	0.68	+3.5
1,529,645	+		Synpcc7942_1477	0.68	+0.1
1,529,667	+		Synpcc7942_1477	0.69	+0.1
1,529,714	+		Synpcc7942_1477	0.72	+0.1
1,529,719	+		Synpcc7942_1477	0.72	+0.7
1,529,719	+		Synpcc7942_1477	0.72	+1.0
1,529,750	+		Synpcc7942_1477	0.73	-1.0
1,529,757	+		Synpcc7942_1477	0.74	+2.8
1,529,809	+		Synpcc7942_1477	0.76	+0.7
1,529,831	+		Synpcc7942_1477	0.77	-0.6
1,529,836	+		Synpcc7942_1477	0.77	-2.6
1,529,900	-		Synpcc7942_1477	0.80	-0.0
1,529,961	+				+2.0
1,529,984	+		Synpcc7942_1477	0.84	+4.4
1,529,984	-		Synpcc7942_1477	0.84	-0.0
1,530,001	-		Synpcc7942_1477	0.85	-1.0
1,530,061	+		Synpcc7942_1477	0.87	+0.4
1,530,073	-		Synpcc7942_1477	0.88	+0.7
1,530,083	-		Synpcc7942_1477	0.88	+1.4
1,530,131	+				+1.4
1,530,148	+				-0.6
1,530,148	+				-1.0
1,530,148	+				-0.8
1,530,148	+				+0.7
1,530,156	-				-0.4
1,530,156	-				-1.3
1,530,156	-				+1.3
1,530,156	-				+3.3
1,530,182	-				+1.6
1,530,195	-				+2.0
1,530,230	+				+3.6
1,530,230	+				+0.4
1,530,253	+				+2.9
1,530,253	+				+2.4
1,530,253	+				+1.5
1,530,253	+				-1.8
1,530,253	+				-0.3
1,530,253	+				+0.5
1,530,253	+				+3.8
1,530,253	+				-2.5
1,530,256	+				-0.6
1,530,261	-				+0.5
1,530,261	-				+0.7
1,530,261	-				-1.3
1,530,261	-				+3.6
1,530,261	-				-2.2
1,530,261	-				+1.5
1,530,261	-				-0.5
1,530,261	-				-0.0
1,530,261	-				-1.0
1,530,261	-				+2.4
1,530,279	+				-0.4
1,530,287	-				-0.6
1,530,288	-				+0.4
1,530,320	-				+0.1
1,530,320	-				+3.4
1,530,351	+				-0.3
1,530,359	-				+0.2
1,530,364	-				-0.0
1,530,412	+				-2.5
1,530,422	+				+1.0
1,530,550	-	cytM	Synpcc7942_1478	0.31	-1.3
1,530,552	+	cytM	Synpcc7942_1478	0.31	+1.0
1,530,560	-	cytM	Synpcc7942_1478	0.33	-2.0
1,530,632	+	cytM	Synpcc7942_1478	0.50	+0.7
1,530,645	+	cytM	Synpcc7942_1478	0.53	-3.8
1,530,654	-	cytM	Synpcc7942_1478	0.55	-1.3
1,530,654	-	cytM	Synpcc7942_1478	0.55	+1.6
1,530,654	-	cytM	Synpcc7942_1478	0.55	-0.6
1,530,654	-	cytM	Synpcc7942_1478	0.55	-0.6
1,530,654	-	cytM	Synpcc7942_1478	0.55	-0.0
1,530,656	+	cytM	Synpcc7942_1478	0.55	-2.5
1,530,664	-	cytM	Synpcc7942_1478	0.57	-0.0
1,530,669	-	cytM	Synpcc7942_1478	0.58	-1.0
1,530,742	+	cytM	Synpcc7942_1478	0.75	-0.6
1,530,742	+	cytM	Synpcc7942_1478	0.75	-1.6
1,530,744	-	cytM	Synpcc7942_1478	0.75	-1.6
1,530,783	+	cytM	Synpcc7942_1478	0.84	-0.1
1,530,847	+				-1.6
1,530,849	+				+1.9
1,530,889	+				-0.3
1,530,889	+				-0.6
1,530,889	+				-1.8
1,530,889	+				-0.5
1,530,895	+				+1.8
1,530,895	+				+3.2
1,530,895	+				-0.6
1,531,191	+				+1.1
1,531,213	+				+0.6
1,531,213	+				+0.6
1,531,213	+				-1.8
1,531,221	-				-0.6
1,531,313	-		Synpcc7942_1480	0.21	-1.0
1,531,313	-		Synpcc7942_1480	0.21	-1.0
1,531,330	-		Synpcc7942_1480	0.25	-0.0