Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36970

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,749,153	+		RR42_RS36965	0.51	-0.3
3,749,258	+		RR42_RS36965	0.56	+1.2
3,749,259	-		RR42_RS36965	0.56	-0.6
3,749,327	+		RR42_RS36965	0.60	-0.7
3,749,327	+		RR42_RS36965	0.60	-0.5
3,749,328	-		RR42_RS36965	0.60	-0.1
3,749,328	-		RR42_RS36965	0.60	+0.0
3,749,328	-		RR42_RS36965	0.60	-0.8
3,749,333	+		RR42_RS36965	0.60	-0.1
3,749,334	-		RR42_RS36965	0.60	+0.0
3,749,603	+		RR42_RS36965	0.73	+0.1
3,749,604	-		RR42_RS36965	0.73	-0.1
3,749,838	-		RR42_RS36965	0.85	-0.5
3,749,848	+		RR42_RS36965	0.86	-0.7
3,750,220	+				+0.4
3,750,220	+				-0.2
3,750,221	-				+0.2
3,750,221	-				-1.9
3,750,221	-				-0.0
3,750,272	-				-2.3
3,750,637	+		RR42_RS36970	0.35	+0.9
3,750,638	-		RR42_RS36970	0.35	-0.8
3,750,638	-		RR42_RS36970	0.35	-0.3
3,750,638	-		RR42_RS36970	0.35	-0.1
3,750,672	+		RR42_RS36970	0.37	+0.3
3,750,672	+		RR42_RS36970	0.37	+1.3
3,750,672	+		RR42_RS36970	0.37	-0.0
3,750,704	-		RR42_RS36970	0.39	-1.2
3,750,877	+		RR42_RS36970	0.51	-0.4
3,750,877	+		RR42_RS36970	0.51	+0.7
3,750,877	+		RR42_RS36970	0.51	+1.1
3,750,878	-		RR42_RS36970	0.51	-0.0
3,751,004	+		RR42_RS36970	0.60	+1.0
3,751,275	+		RR42_RS36970	0.79	+0.8
3,751,275	+		RR42_RS36970	0.79	-0.1
3,751,275	+		RR42_RS36970	0.79	-2.1
3,751,275	+		RR42_RS36970	0.79	-1.2
3,751,276	-		RR42_RS36970	0.79	-1.1
3,751,348	+		RR42_RS36970	0.84	-0.0
3,751,349	-		RR42_RS36970	0.84	+0.5
3,751,349	-		RR42_RS36970	0.84	-0.0
3,751,444	+				+0.4
3,751,444	+				+0.1
3,751,445	-				+0.3
3,751,445	-				-0.2
3,751,477	+				-0.3
3,751,477	+				-0.2
3,751,540	+				+0.1
3,751,541	-				+0.3
3,751,541	-				-0.4
3,751,648	+				-0.1
3,751,648	+				-0.9
3,751,649	-				+0.5
3,751,793	+				+0.6
3,751,829	+		RR42_RS36975	0.11	-0.3
3,751,891	-		RR42_RS36975	0.21	+0.2
3,751,892	+		RR42_RS36975	0.21	+0.3
3,751,892	+		RR42_RS36975	0.21	-2.6
3,751,893	-		RR42_RS36975	0.21	-0.7
3,751,905	+		RR42_RS36975	0.23	-0.5
3,751,905	+		RR42_RS36975	0.23	-0.3
3,751,905	+		RR42_RS36975	0.23	-1.1
3,752,078	+		RR42_RS36975	0.50	-0.8
3,752,162	+		RR42_RS36975	0.63	-0.9
3,752,499	+		RR42_RS36980	0.12	-0.1