Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36030

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,530,907	+		RR42_RS36025	0.86	+1.3
3,530,908	-		RR42_RS36025	0.87	+1.3
3,531,101	+				-1.4
3,531,119	+				-1.2
3,531,119	+				-0.2
3,531,119	+				+0.8
3,531,120	-				+0.1
3,531,120	-				-0.3
3,531,120	-				+2.0
3,531,156	+				-0.3
3,531,157	-				-0.3
3,531,157	-				+0.0
3,531,288	+				-0.0
3,531,288	+				-0.0
3,531,297	-				-0.8
3,531,299	+				-0.2
3,531,299	+				-0.6
3,531,299	+				-1.3
3,531,300	-				-1.0
3,531,497	+		RR42_RS36030	0.12	-0.1
3,531,497	+		RR42_RS36030	0.12	+0.1
3,531,497	+		RR42_RS36030	0.12	-2.7
3,531,497	+		RR42_RS36030	0.12	-0.2
3,531,498	-		RR42_RS36030	0.12	+0.1
3,531,645	+		RR42_RS36030	0.21	-0.1
3,531,646	-		RR42_RS36030	0.21	+1.6
3,531,849	+		RR42_RS36030	0.33	-1.6
3,531,850	-		RR42_RS36030	0.33	-0.5
3,531,859	+		RR42_RS36030	0.33	+1.3
3,531,860	-		RR42_RS36030	0.33	+0.3
3,531,860	-		RR42_RS36030	0.33	+0.8
3,531,984	+		RR42_RS36030	0.41	-0.2
3,531,984	+		RR42_RS36030	0.41	-0.6
3,532,054	+		RR42_RS36030	0.45	+0.2
3,532,101	+		RR42_RS36030	0.48	-0.2
3,532,101	+		RR42_RS36030	0.48	-0.2
3,532,101	+		RR42_RS36030	0.48	+0.8
3,532,101	+		RR42_RS36030	0.48	-0.3
3,532,101	+		RR42_RS36030	0.48	+0.0
3,532,102	-		RR42_RS36030	0.48	-1.3
3,532,102	-		RR42_RS36030	0.48	-0.1
3,532,222	-		RR42_RS36030	0.55	-0.0
3,532,335	+		RR42_RS36030	0.62	-0.4
3,532,336	-		RR42_RS36030	0.62	-1.1
3,532,337	+		RR42_RS36030	0.62	+1.2
3,532,407	+		RR42_RS36030	0.66	-0.2
3,532,408	-		RR42_RS36030	0.66	+0.5
3,532,455	+		RR42_RS36030	0.69	-0.3
3,532,455	+		RR42_RS36030	0.69	-0.6
3,532,724	+		RR42_RS36030	0.85	+1.0
3,532,725	-		RR42_RS36030	0.85	-0.1
3,532,761	+		RR42_RS36030	0.87	-0.4
3,532,761	+		RR42_RS36030	0.87	+0.1
3,532,762	-		RR42_RS36030	0.87	-0.2
3,532,789	-		RR42_RS36030	0.89	+1.1
3,532,864	-				+0.5
3,532,950	+				-0.2
3,532,950	+				+0.1
3,532,951	-				-0.4
3,532,951	-				+0.7
3,532,957	-				+2.4
3,532,957	-				+0.4
3,532,968	+				-1.6
3,532,968	+				-1.1
3,532,969	-				+0.4
3,533,021	+				-1.7
3,533,021	+				-0.2
3,533,021	+				-0.1
3,533,021	+				+0.4
3,533,021	+				-0.2
3,533,021	+				-0.3
3,533,022	-				-0.1
3,533,022	-				+0.2
3,533,387	-				-0.8
3,533,537	+		RR42_RS36035	0.17	+1.0
3,533,537	+		RR42_RS36035	0.17	+0.1
3,533,649	-		RR42_RS36035	0.21	+1.7
3,533,750	+				+1.7
3,533,750	+		RR42_RS36035	0.26	+0.2
3,533,750	+		RR42_RS36035	0.26	+0.3
3,533,751	-		RR42_RS36035	0.26	-0.0
3,533,751	-		RR42_RS36035	0.26	+0.2
3,533,927	+		RR42_RS36035	0.34	-0.3
3,533,928	-		RR42_RS36035	0.34	-0.2
3,533,928	-		RR42_RS36035	0.34	+0.5
3,533,928	-		RR42_RS36035	0.34	-0.3
3,533,930	+		RR42_RS36035	0.34	-0.4
3,533,930	+		RR42_RS36035	0.34	-0.2
3,533,930	+		RR42_RS36035	0.34	+0.3
3,533,931	-		RR42_RS36035	0.34	+0.9
3,533,931	-		RR42_RS36035	0.34	-1.1