Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35280

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,368,844	+				+0.9
3,368,844	+				-0.6
3,368,845	-				+1.9
3,368,845	-				-0.4
3,368,845	-				-0.5
3,369,292	+		RR42_RS35275	0.46	+0.1
3,369,292	+		RR42_RS35275	0.46	-0.2
3,369,293	-		RR42_RS35275	0.46	-0.2
3,369,426	+		RR42_RS35275	0.60	-0.3
3,369,773	+				-1.1
3,369,798	+				-0.4
3,369,799	-				-0.4
3,369,951	+		RR42_RS35280	0.16	-0.4
3,369,951	+		RR42_RS35280	0.16	-0.7
3,369,951	+		RR42_RS35280	0.16	-0.4
3,369,951	+		RR42_RS35280	0.16	-0.2
3,369,951	+		RR42_RS35280	0.16	-0.9
3,369,951	+		RR42_RS35280	0.16	-0.8
3,369,951	+		RR42_RS35280	0.16	+0.4
3,369,952	-		RR42_RS35280	0.17	-0.8
3,369,952	-		RR42_RS35280	0.17	-0.5
3,369,952	-		RR42_RS35280	0.17	-0.9
3,369,952	-		RR42_RS35280	0.17	+0.2
3,369,952	-		RR42_RS35280	0.17	-0.6
3,369,952	-		RR42_RS35280	0.17	-0.5
3,369,952	-		RR42_RS35280	0.17	-0.1
3,369,952	-		RR42_RS35280	0.17	-1.2
3,369,992	+		RR42_RS35280	0.21	-0.3
3,369,992	+		RR42_RS35280	0.21	-0.3
3,369,992	+		RR42_RS35280	0.21	-0.1
3,369,993	-		RR42_RS35280	0.21	+0.8
3,369,993	-		RR42_RS35280	0.21	-1.2
3,370,083	-		RR42_RS35280	0.32	-0.7
3,370,801	+				+0.7
3,370,801	+				+0.3
3,370,802	-				-0.1
3,370,811	+				-1.3
3,370,811	+				-0.6
3,370,812	-				-0.3
3,370,812	-				-0.9
3,370,812	-				-0.1
3,370,812	-				+0.7
3,370,812	-				-0.3
3,370,813	+				-0.8
3,370,813	+				+0.1
3,370,813	+				-2.0
3,370,813	+				-1.6
3,370,813	+				-0.6
3,370,813	+				+0.2
3,370,813	+				-1.4
3,370,814	-				-0.4
3,370,834	+		RR42_RS35285	0.11	-1.8
3,370,834	+		RR42_RS35285	0.11	+0.6
3,370,834	+		RR42_RS35285	0.11	-0.6
3,370,834	+		RR42_RS35285	0.11	-0.8
3,370,834	+		RR42_RS35285	0.11	-0.7
3,370,834	+		RR42_RS35285	0.11	-0.5
3,370,834	+		RR42_RS35285	0.11	-0.7
3,370,834	+		RR42_RS35285	0.11	+0.1
3,370,835	-		RR42_RS35285	0.11	-0.2
3,370,835	-		RR42_RS35285	0.11	-1.2
3,370,835	-		RR42_RS35285	0.11	+0.7
3,370,835	-		RR42_RS35285	0.11	-0.2
3,370,835	-		RR42_RS35285	0.11	-0.3
3,370,952	-		RR42_RS35285	0.19	-0.6
3,370,954	-		RR42_RS35285	0.19	+0.0
3,370,954	-		RR42_RS35285	0.19	-0.2
3,370,954	-		RR42_RS35285	0.19	-0.0
3,370,954	-		RR42_RS35285	0.19	+1.4
3,371,243	-		RR42_RS35285	0.40	-0.0
3,371,243	-		RR42_RS35285	0.40	-0.5
3,371,499	-		RR42_RS35285	0.58	-1.2
3,371,500	+		RR42_RS35285	0.58	+0.1
3,371,501	-		RR42_RS35285	0.58	-0.9
3,371,501	-		RR42_RS35285	0.58	-1.6
3,371,501	-		RR42_RS35285	0.58	-0.0
3,371,512	+		RR42_RS35285	0.59	-0.8
3,371,539	+		RR42_RS35285	0.60	-0.5
3,371,539	+		RR42_RS35285	0.60	-0.2
3,371,540	-		RR42_RS35285	0.60	-0.1
3,371,566	+		RR42_RS35285	0.62	-1.3
3,371,566	+		RR42_RS35285	0.62	+1.0
3,371,567	-		RR42_RS35285	0.62	+1.7
3,371,567	-		RR42_RS35285	0.62	+0.1
3,371,653	+		RR42_RS35285	0.68	+0.1
3,371,654	-		RR42_RS35285	0.68	+0.2