Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34465

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,160,613	-				+0.0
3,160,613	-				+1.9
3,160,812	+		RR42_RS34460	0.29	+1.8
3,160,993	+		RR42_RS34460	0.47	-1.7
3,160,994	-		RR42_RS34460	0.47	-0.0
3,161,039	-		RR42_RS34460	0.52	-0.5
3,161,063	-		RR42_RS34460	0.54	-0.5
3,161,105	-		RR42_RS34460	0.59	-0.4
3,161,179	+		RR42_RS34460	0.66	-0.9
3,161,179	+		RR42_RS34460	0.66	-1.1
3,161,180	-		RR42_RS34460	0.66	-0.6
3,161,180	-		RR42_RS34460	0.66	+0.6
3,161,227	+		RR42_RS34460	0.71	-0.1
3,161,489	+				+0.7
3,161,520	+				-1.7
3,161,520	+				+0.1
3,161,521	-				-1.1
3,161,865	+		RR42_RS34465	0.31	+0.6
3,161,865	+		RR42_RS34465	0.31	+0.6
3,161,866	-		RR42_RS34465	0.31	+0.2
3,161,986	-		RR42_RS34465	0.42	-1.5
3,161,986	-		RR42_RS34465	0.42	-2.5
3,162,102	+		RR42_RS34465	0.52	-0.0
3,162,103	-		RR42_RS34465	0.52	-0.6
3,162,123	+		RR42_RS34465	0.54	-1.5
3,162,147	+		RR42_RS34465	0.56	+0.4
3,162,250	-		RR42_RS34465	0.65	-1.3
3,162,384	+		RR42_RS34465	0.77	-1.0
3,162,385	-		RR42_RS34465	0.77	+0.8
3,162,385	-		RR42_RS34465	0.77	-1.9
3,162,514	+		RR42_RS34465	0.89	-0.6
3,162,585	+				+0.1
3,162,585	+				+0.6
3,162,585	+				-0.5
3,162,585	+				+0.3
3,162,586	-				-0.2
3,162,663	+				-0.7
3,162,704	+				-0.7
3,162,704	+				-0.8
3,162,959	+		RR42_RS34470	0.11	-0.4
3,163,508	+		RR42_RS34470	0.36	+0.3