Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34435

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,152,783	-		RR42_RS34430	0.55	-0.5
3,152,989	+		RR42_RS34430	0.67	-0.6
3,152,996	-		RR42_RS34430	0.67	+0.1
3,153,199	+		RR42_RS34430	0.79	-0.1
3,153,200	-		RR42_RS34430	0.79	-1.1
3,153,200	-		RR42_RS34430	0.79	-0.3
3,153,202	+		RR42_RS34430	0.79	-0.9
3,153,202	+		RR42_RS34430	0.79	-1.1
3,153,354	-		RR42_RS34430	0.88	-0.9
3,153,355	+		RR42_RS34430	0.88	-0.2
3,153,413	-				+0.4
3,153,552	-				-0.2
3,153,552	-				+0.4
3,154,065	-		RR42_RS34435	0.30	-0.8
3,154,580	+		RR42_RS34435	0.72	-1.0
3,154,586	+		RR42_RS34435	0.73	-0.2
3,154,586	+		RR42_RS34435	0.73	-1.0
3,154,586	+		RR42_RS34435	0.73	-0.8
3,154,586	+		RR42_RS34435	0.73	-1.2
3,154,587	-		RR42_RS34435	0.73	+0.3
3,154,587	-		RR42_RS34435	0.73	-0.5
3,154,638	-		RR42_RS34435	0.77	+0.5
3,154,715	+		RR42_RS34435	0.83	-0.2
3,154,716	-		RR42_RS34435	0.84	+0.6
3,154,716	-		RR42_RS34435	0.84	-0.1
3,154,721	+		RR42_RS34435	0.84	-0.0
3,154,722	-		RR42_RS34435	0.84	+0.2
3,154,722	-		RR42_RS34435	0.84	+0.3
3,154,725	-		RR42_RS34435	0.84	-0.9
3,154,776	-		RR42_RS34435	0.89	-2.9
3,155,467	+		RR42_RS34440	0.25	+0.5
3,155,528	-		RR42_RS34440	0.30	+1.2
3,155,530	-		RR42_RS34440	0.30	-0.2
3,155,539	+		RR42_RS34440	0.31	-2.2