Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33410

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,910,855	+		RR42_RS33405	0.38	-0.7
2,911,217	-		RR42_RS33405	0.70	+0.5
2,911,244	-		RR42_RS33405	0.73	+0.5
2,911,268	+		RR42_RS33405	0.75	+0.2
2,911,269	-		RR42_RS33405	0.75	-0.0
2,911,644	+				+0.8
2,911,681	+				+0.5
2,911,682	-				+0.1
2,911,785	+				+1.0
2,911,822	+				-0.1
2,911,836	+				+0.4
2,911,836	+				-1.6
2,911,837	-				-0.1
2,912,067	+				+0.1
2,912,068	-				-0.3
2,912,145	+		RR42_RS33410	0.12	-0.3
2,912,343	+		RR42_RS33410	0.18	+0.4
2,912,346	+		RR42_RS33410	0.18	-0.1
2,912,346	+		RR42_RS33410	0.18	+1.7
2,912,347	-		RR42_RS33410	0.18	+0.1
2,912,423	+		RR42_RS33410	0.20	-0.3
2,912,423	+		RR42_RS33410	0.20	+0.5
2,912,423	+		RR42_RS33410	0.20	+2.0
2,912,424	-		RR42_RS33410	0.20	-0.2
2,912,739	+		RR42_RS33410	0.31	+1.3
2,912,739	+		RR42_RS33410	0.31	+0.6
2,912,739	+		RR42_RS33410	0.31	+0.1
2,912,739	+		RR42_RS33410	0.31	+1.1
2,912,740	-		RR42_RS33410	0.31	-0.3
2,912,740	-		RR42_RS33410	0.31	+0.3
2,913,367	+		RR42_RS33410	0.51	-0.2
2,913,368	-		RR42_RS33410	0.51	+1.4
2,913,396	+		RR42_RS33410	0.52	-0.5
2,913,918	+		RR42_RS33410	0.68	+1.7
2,913,919	-		RR42_RS33410	0.68	+0.3
2,913,919	-		RR42_RS33410	0.68	-0.1
2,913,919	-		RR42_RS33410	0.68	+0.7
2,914,085	+		RR42_RS33410	0.74	-2.1
2,914,086	-		RR42_RS33410	0.74	+0.1
2,914,086	-		RR42_RS33410	0.74	+0.6
2,914,086	-		RR42_RS33410	0.74	+0.5
2,914,125	+		RR42_RS33410	0.75	+0.0
2,914,125	+		RR42_RS33410	0.75	+1.5
2,914,125	+		RR42_RS33410	0.75	-0.5
2,914,125	+		RR42_RS33410	0.75	+0.3
2,914,126	-		RR42_RS33410	0.75	+0.8
2,914,126	-		RR42_RS33410	0.75	+0.4
2,914,169	-		RR42_RS33410	0.76	+0.2
2,914,210	-		RR42_RS33410	0.78	+1.1
2,914,210	-		RR42_RS33410	0.78	+0.9
2,914,210	-		RR42_RS33410	0.78	+1.0
2,914,221	+		RR42_RS33410	0.78	+0.1
2,914,222	-		RR42_RS33410	0.78	+0.4
2,914,275	+		RR42_RS33410	0.80	+0.4
2,914,275	+		RR42_RS33410	0.80	+1.0
2,914,335	+		RR42_RS33410	0.82	+0.8
2,914,488	+		RR42_RS33410	0.86	+1.3
2,914,489	-		RR42_RS33410	0.86	+0.5
2,914,494	+		RR42_RS33410	0.87	-0.7
2,914,495	-		RR42_RS33410	0.87	+1.0
2,914,602	+				-0.4
2,914,602	+				+0.1
2,914,602	+				+0.2
2,914,603	-				+0.1
2,914,603	-				-1.1
2,914,603	-				+1.0
2,915,082	+		RR42_RS33415	0.14	-0.4
2,915,262	+		RR42_RS33415	0.30	+1.7
2,915,262	+		RR42_RS33415	0.30	-0.1
2,915,262	+		RR42_RS33415	0.30	+0.7
2,915,262	+		RR42_RS33415	0.30	+0.2
2,915,262	+		RR42_RS33415	0.30	-0.3
2,915,263	-		RR42_RS33415	0.30	+0.3
2,915,412	+		RR42_RS33415	0.42	+0.2
2,915,499	+		RR42_RS33415	0.50	+0.5
2,915,753	-		RR42_RS33415	0.72	-0.9
2,915,753	-		RR42_RS33415	0.72	+0.7
2,915,753	-		RR42_RS33415	0.72	-0.0