Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32685

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,726,766	+		RR42_RS32675	0.61	+0.1
2,726,854	-		RR42_RS32675	0.66	-1.1
2,726,872	+		RR42_RS32675	0.68	+0.3
2,726,872	+		RR42_RS32675	0.68	-0.6
2,726,872	+		RR42_RS32675	0.68	+1.4
2,726,873	-		RR42_RS32675	0.68	-0.4
2,726,873	-		RR42_RS32675	0.68	+1.0
2,726,901	+		RR42_RS32675	0.70	+0.6
2,726,901	+		RR42_RS32675	0.70	-0.6
2,727,021	+		RR42_RS32675	0.77	-0.1
2,727,175	-		RR42_RS32675	0.88	-0.9
2,727,175	-		RR42_RS32675	0.88	+1.0
2,727,249	+				-0.2
2,727,250	-				+1.2
2,727,250	-				-0.5
2,727,285	+				+0.2
2,727,285	+				-1.2
2,727,324	+				-0.3
2,727,418	-				+0.9
2,727,700	+				-0.3
2,728,229	-		RR42_RS32685	0.50	+0.7
2,728,261	+		RR42_RS32685	0.53	-0.2
2,728,474	+		RR42_RS32685	0.75	-1.5
2,728,489	+		RR42_RS32685	0.76	-0.4
2,728,552	+		RR42_RS32685	0.83	-0.8
2,728,615	+		RR42_RS32685	0.89	+0.2
2,728,616	-		RR42_RS32685	0.89	-1.3
2,728,676	-				-0.5
2,728,753	+				+0.2
2,728,754	-				+0.0
2,728,754	-				-0.1
2,729,045	+				-0.5
2,729,045	+				-1.3
2,729,054	+				+1.0
2,729,055	-				-0.2
2,729,353	+				-0.3
2,729,353	+				+0.2
2,729,354	-				+0.8
2,729,394	-				-0.3
2,729,522	+				-0.3
2,729,522	+				+0.7
2,729,523	-				-0.0
2,729,600	+				+0.4
2,729,601	-				-0.5