Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32215

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,613,380	-		RR42_RS32210	0.59	+0.4
2,613,486	+		RR42_RS32210	0.73	-1.3
2,613,567	+		RR42_RS32210	0.83	-0.0
2,613,568	-		RR42_RS32210	0.83	+0.4
2,613,606	+		RR42_RS32210	0.88	+0.1
2,613,607	-		RR42_RS32210	0.88	+0.6
2,613,740	+				-1.0
2,613,740	+				+0.2
2,613,821	+				-1.6
2,613,821	+				-0.1
2,613,821	+				-1.1
2,613,821	+				+1.3
2,613,822	-				-0.7
2,613,822	-				-0.5
2,613,822	-				-0.4
2,613,822	-				+0.8
2,613,860	+				-0.0
2,613,863	+				+0.4
2,613,864	-				-0.3
2,613,900	-				-0.0
2,613,939	+				-2.1
2,613,940	-				+1.0
2,613,993	+				-0.0
2,614,220	+		RR42_RS32215	0.11	-0.7
2,614,220	+		RR42_RS32215	0.11	-0.1
2,614,221	-		RR42_RS32215	0.11	-0.1
2,614,221	-		RR42_RS32215	0.11	-0.2
2,614,245	+		RR42_RS32215	0.14	-0.5
2,614,471	-		RR42_RS32215	0.39	+0.2
2,614,471	-		RR42_RS32215	0.39	+1.2
2,614,471	-		RR42_RS32215	0.39	-1.7
2,614,545	+		RR42_RS32215	0.48	-0.4
2,614,563	-		RR42_RS32215	0.50	-0.6
2,614,698	+		RR42_RS32215	0.65	-0.8
2,614,699	-		RR42_RS32215	0.66	+0.6
2,614,699	-		RR42_RS32215	0.66	+0.6
2,614,734	+		RR42_RS32215	0.70	-1.6
2,614,734	+		RR42_RS32215	0.70	-1.0
2,614,735	-		RR42_RS32215	0.70	+0.8
2,615,028	+				-0.2
2,615,028	+				-0.0
2,615,044	+				+0.0
2,615,044	+				+0.3
2,615,302	+		RR42_RS32220	0.20	-0.9
2,615,302	+		RR42_RS32220	0.20	+0.2
2,615,302	+		RR42_RS32220	0.20	+0.1
2,615,303	-		RR42_RS32220	0.20	-0.9
2,615,303	-		RR42_RS32220	0.20	+0.1
2,615,475	+		RR42_RS32220	0.35	+0.3
2,615,779	+		RR42_RS32220	0.62	-0.3
2,615,780	-		RR42_RS32220	0.62	-0.9
2,615,901	-		RR42_RS32220	0.73	-0.3
2,615,916	-		RR42_RS32220	0.74	-0.7
2,615,916	-		RR42_RS32220	0.74	-2.5
2,615,964	-		RR42_RS32220	0.78	-0.4