Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30955

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,328,366	+		RR42_RS30950	0.77	-0.1
2,328,366	+		RR42_RS30950	0.77	+0.8
2,328,367	-		RR42_RS30950	0.77	+0.9
2,328,367	-		RR42_RS30950	0.77	-1.4
2,328,382	+		RR42_RS30950	0.77	+1.9
2,328,382	+		RR42_RS30950	0.77	+0.7
2,328,382	+		RR42_RS30950	0.77	+1.6
2,328,382	+		RR42_RS30950	0.77	+1.6
2,328,383	-		RR42_RS30950	0.77	-0.1
2,328,383	-		RR42_RS30950	0.77	+1.2
2,328,384	+		RR42_RS30950	0.77	+0.5
2,328,385	-		RR42_RS30950	0.77	+1.5
2,328,385	-		RR42_RS30950	0.77	+0.5
2,328,410	+		RR42_RS30950	0.78	+0.9
2,328,792	-				+0.7
2,328,889	-				+1.0
2,328,952	-				-0.2
2,328,989	+				+1.1
2,328,989	+				-0.8
2,329,016	+				+0.8
2,329,016	+				+1.1
2,329,016	+				+0.9
2,329,017	-				-0.9
2,329,017	-				+3.2
2,329,017	-				+1.1
2,329,177	+				+0.4
2,329,177	+				+1.1
2,329,279	+				+0.3
2,329,400	+				-0.6
2,329,400	+				+0.6
2,329,465	+		RR42_RS30955	0.13	-0.4
2,329,711	+		RR42_RS30955	0.30	-1.0
2,329,711	+		RR42_RS30955	0.30	+1.0
2,329,714	+		RR42_RS30955	0.30	-0.1
2,329,715	-		RR42_RS30955	0.30	+0.9
2,329,868	-		RR42_RS30955	0.41	-0.1
2,329,868	-		RR42_RS30955	0.41	+0.5
2,330,150	-		RR42_RS30955	0.60	+0.5
2,330,209	+		RR42_RS30955	0.65	+0.1
2,330,209	+		RR42_RS30955	0.65	+0.9
2,330,332	+				+2.2
2,330,623	+				-0.5
2,330,624	-				+0.1
2,330,624	-				+1.1
2,330,710	-				+0.0
2,330,710	-				+0.4
2,330,775	-				+0.3
2,330,868	+		RR42_RS30960	0.18	-0.2
2,330,868	+		RR42_RS30960	0.18	+0.1
2,330,868	+		RR42_RS30960	0.18	-0.3
2,330,868	+		RR42_RS30960	0.18	+0.3
2,330,868	+		RR42_RS30960	0.18	-0.7
2,330,868	+		RR42_RS30960	0.18	+1.2
2,330,869	-		RR42_RS30960	0.18	+0.2
2,331,134	+		RR42_RS30960	0.57	-0.1
2,331,134	+		RR42_RS30960	0.57	+0.0
2,331,135	-		RR42_RS30960	0.57	+0.6
2,331,291	-		RR42_RS30960	0.80	+0.2
2,331,291	-		RR42_RS30960	0.80	+0.2
2,331,291	-		RR42_RS30960	0.80	+0.4
2,331,291	-		RR42_RS30960	0.80	-0.2
2,331,291	-		RR42_RS30960	0.80	-0.2
2,331,291	-		RR42_RS30960	0.80	+0.5
2,331,380	+				+0.4
2,331,380	+				+0.5
2,331,381	-				+2.1
2,331,381	-				+0.5
2,331,415	+				-0.1
2,331,415	+				+1.1
2,331,415	+				-1.4
2,331,416	-				-2.5
2,331,423	+				-0.8
2,331,423	+				+0.0
2,331,424	-				-0.6
2,331,424	-				+0.9
2,331,428	-				-0.1
2,331,428	-				+0.7
2,331,471	-				+0.4
2,331,471	-				+0.9
2,331,471	-				+0.7
2,331,471	-				-0.2
2,331,472	+				-0.4
2,331,473	-				+0.6
2,331,473	-				+0.4
2,331,549	+				+0.1
2,331,550	-				+0.1
2,331,554	+				+0.2
2,331,594	+				+1.2
2,331,595	-				+1.5
2,331,595	-				+0.8
2,331,598	+				+1.4
2,331,598	+				-0.4
2,331,599	-				+1.1
2,331,599	-				-0.5