Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30175

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,142,845	+				+0.8
2,142,846	-				-0.9
2,142,846	-				+2.3
2,143,034	+		RR42_RS30170	0.25	+0.4
2,143,034	+		RR42_RS30170	0.25	-0.6
2,143,035	-		RR42_RS30170	0.25	-0.7
2,143,035	-		RR42_RS30170	0.25	+0.1
2,143,035	-		RR42_RS30170	0.25	+0.2
2,143,266	+		RR42_RS30170	0.55	+0.3
2,143,272	+		RR42_RS30170	0.56	+2.1
2,143,272	+		RR42_RS30170	0.56	-1.0
2,143,600	-				+0.9
2,143,630	+				+0.4
2,143,731	+				+0.4
2,143,793	+				-0.7
2,143,793	+				-0.0
2,143,793	+				+0.5
2,143,794	-				+0.2
2,143,915	+				+1.0
2,144,045	-		RR42_RS30175	0.13	-1.0
2,144,118	+		RR42_RS30175	0.17	-0.7
2,144,118	+		RR42_RS30175	0.17	-0.2
2,144,118	+		RR42_RS30175	0.17	-0.6
2,144,118	+		RR42_RS30175	0.17	-0.4
2,144,119	-		RR42_RS30175	0.17	+0.3
2,144,202	+		RR42_RS30175	0.21	-0.6
2,144,323	+		RR42_RS30175	0.26	+1.3
2,144,539	-		RR42_RS30175	0.36	-0.1
2,144,863	+		RR42_RS30175	0.52	+0.7
2,144,863	+		RR42_RS30175	0.52	-0.6
2,144,864	-		RR42_RS30175	0.52	+0.4
2,144,956	-		RR42_RS30175	0.56	-0.7
2,145,112	-		RR42_RS30175	0.63	-0.2
2,145,112	-		RR42_RS30175	0.63	+0.2
2,145,201	+		RR42_RS30175	0.68	+0.4
2,145,201	+		RR42_RS30175	0.68	+0.2
2,145,202	-		RR42_RS30175	0.68	-0.4
2,145,222	+		RR42_RS30175	0.69	-0.5
2,145,223	-		RR42_RS30175	0.69	+0.6
2,145,223	-		RR42_RS30175	0.69	-2.2
2,145,510	-		RR42_RS30175	0.82	-2.2
2,145,707	+				-0.7
2,145,707	+				+1.5
2,145,708	-				-0.5
2,145,708	-				-0.1
2,146,407	+		RR42_RS30180	0.31	-0.1
2,146,557	+		RR42_RS30180	0.41	+0.4
2,146,570	-		RR42_RS30180	0.42	-0.4
2,146,761	+		RR42_RS30180	0.56	+0.2
2,146,762	-		RR42_RS30180	0.56	+0.2
2,146,762	-		RR42_RS30180	0.56	-0.3
2,146,762	-		RR42_RS30180	0.56	-0.7
2,146,762	-		RR42_RS30180	0.56	-0.6
2,146,762	-		RR42_RS30180	0.56	+0.0
2,146,762	-		RR42_RS30180	0.56	+1.7