Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29380

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,943,463	+		RR42_RS29375	0.71	-0.9
1,943,463	+		RR42_RS29375	0.71	-0.1
1,943,464	-		RR42_RS29375	0.71	+1.5
1,943,464	-		RR42_RS29375	0.71	+0.8
1,943,481	+		RR42_RS29375	0.71	-0.6
1,943,532	+		RR42_RS29375	0.74	-0.9
1,943,532	+		RR42_RS29375	0.74	-1.0
1,943,532	+		RR42_RS29375	0.74	-0.2
1,943,532	+		RR42_RS29375	0.74	+0.2
1,943,532	+		RR42_RS29375	0.74	-0.4
1,943,532	+		RR42_RS29375	0.74	+2.2
1,943,532	+		RR42_RS29375	0.74	+0.4
1,943,532	+		RR42_RS29375	0.74	-0.2
1,943,533	-		RR42_RS29375	0.74	+1.0
1,943,533	-		RR42_RS29375	0.74	+0.6
1,943,589	+		RR42_RS29375	0.76	-1.5
1,943,590	-		RR42_RS29375	0.76	+0.2
1,943,590	-		RR42_RS29375	0.76	-0.8
1,943,750	+		RR42_RS29375	0.82	+0.1
1,943,788	+		RR42_RS29375	0.84	-0.7
1,943,809	+		RR42_RS29375	0.85	-0.5
1,943,810	-		RR42_RS29375	0.85	+1.3
1,943,810	-		RR42_RS29375	0.85	+1.3
1,943,811	+		RR42_RS29375	0.85	-0.2
1,943,811	+		RR42_RS29375	0.85	+0.3
1,943,811	+		RR42_RS29375	0.85	+1.6
1,943,812	-		RR42_RS29375	0.85	-0.3
1,943,812	-		RR42_RS29375	0.85	-0.2
1,943,859	+		RR42_RS29375	0.87	-0.2
1,943,859	+		RR42_RS29375	0.87	-0.4
1,943,859	+		RR42_RS29375	0.87	+0.8
1,943,860	-		RR42_RS29375	0.87	-0.0
1,944,090	+				-0.3
1,944,091	-				+0.9
1,944,091	-				-0.4
1,944,231	+				+0.6
1,944,231	+				-1.8
1,944,232	-				-2.6
1,944,232	-				-0.2
1,944,232	-				+1.1
1,944,232	-				-0.0
1,944,402	+		RR42_RS29380	0.38	+0.1
1,944,403	-		RR42_RS29380	0.38	+1.1
1,944,427	+		RR42_RS29380	0.43	-1.1
1,944,427	+		RR42_RS29380	0.43	+0.8
1,944,428	-		RR42_RS29380	0.43	+1.2
1,944,428	-		RR42_RS29380	0.43	+0.0
1,944,872	+				+1.4
1,944,921	+				+1.7
1,944,921	+				-0.2
1,944,921	+				-0.4
1,944,922	-				-0.7
1,944,922	-				+0.7
1,944,935	-				+0.3
1,944,974	-				+0.2
1,944,974	-				+0.2
1,944,978	+				+0.3
1,944,979	-				+1.6
1,944,979	-				-1.4
1,944,984	+				+0.5
1,944,985	-				+0.3
1,944,985	-				+0.6
1,945,128	+				-0.1
1,945,128	+				-1.0
1,945,129	-				-0.9
1,945,215	+				-0.7
1,945,216	-				-1.7
1,945,216	-				+1.1
1,945,267	+				+0.1
1,945,296	+		RR42_RS29385	0.11	-0.2
1,945,296	+		RR42_RS29385	0.11	-0.2
1,945,296	+		RR42_RS29385	0.11	+0.1
1,945,297	-		RR42_RS29385	0.11	+0.3
1,945,297	-		RR42_RS29385	0.11	-1.8
1,945,297	-		RR42_RS29385	0.11	+0.6
1,945,297	-		RR42_RS29385	0.11	+0.1
1,945,297	-		RR42_RS29385	0.11	+0.5
1,945,322	-		RR42_RS29385	0.12	-0.3
1,945,322	-		RR42_RS29385	0.12	+0.3
1,945,322	-		RR42_RS29385	0.12	-0.9
1,945,322	-		RR42_RS29385	0.12	+1.0
1,945,322	-		RR42_RS29385	0.12	+0.4
1,945,428	+		RR42_RS29385	0.19	+0.3
1,945,428	+		RR42_RS29385	0.19	+0.1
1,945,428	+		RR42_RS29385	0.19	-0.4
1,945,429	-		RR42_RS29385	0.19	-0.1
1,945,429	-		RR42_RS29385	0.19	-2.3
1,945,429	-		RR42_RS29385	0.19	+0.6
1,945,429	-		RR42_RS29385	0.19	+0.1
1,945,445	+		RR42_RS29385	0.20	+1.6