Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28600

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,771,805	-		RR42_RS28595	0.52	-0.4
1,771,912	+		RR42_RS28595	0.58	+0.1
1,771,912	+		RR42_RS28595	0.58	-3.0
1,772,089	+		RR42_RS28595	0.67	-1.1
1,772,168	+		RR42_RS28595	0.71	+0.0
1,772,169	-		RR42_RS28595	0.71	-1.6
1,772,169	-		RR42_RS28595	0.71	-0.7
1,772,230	+		RR42_RS28595	0.74	-1.5
1,772,287	+		RR42_RS28595	0.77	-0.5
1,772,287	+		RR42_RS28595	0.77	-1.7
1,772,287	+		RR42_RS28595	0.77	-1.0
1,772,287	+		RR42_RS28595	0.77	-1.7
1,772,287	+		RR42_RS28595	0.77	-0.4
1,772,287	+		RR42_RS28595	0.77	-1.4
1,772,288	-		RR42_RS28595	0.77	-0.2
1,772,288	-		RR42_RS28595	0.77	-2.0
1,772,288	-		RR42_RS28595	0.77	-1.2
1,772,288	-		RR42_RS28595	0.77	-0.6
1,772,288	-		RR42_RS28595	0.77	-1.1
1,772,288	-		RR42_RS28595	0.77	-0.5
1,772,288	-		RR42_RS28595	0.77	-1.3
1,772,288	-		RR42_RS28595	0.77	-0.7
1,772,289	+		RR42_RS28595	0.77	-1.7
1,772,289	+		RR42_RS28595	0.77	+0.6
1,772,289	+		RR42_RS28595	0.77	-2.6
1,772,289	+		RR42_RS28595	0.77	-0.9
1,772,290	-		RR42_RS28595	0.78	-0.5
1,772,290	-		RR42_RS28595	0.78	-0.9
1,772,293	+		RR42_RS28595	0.78	-1.5
1,772,293	+		RR42_RS28595	0.78	-1.9
1,772,293	+		RR42_RS28595	0.78	-1.3
1,772,293	+		RR42_RS28595	0.78	-1.6
1,772,293	+		RR42_RS28595	0.78	-2.4
1,772,294	-		RR42_RS28595	0.78	-1.0
1,772,294	-		RR42_RS28595	0.78	-1.9
1,772,294	-		RR42_RS28595	0.78	-2.4
1,772,354	-		RR42_RS28595	0.81	-1.3
1,772,354	-		RR42_RS28595	0.81	-1.4
1,772,381	+		RR42_RS28595	0.82	-2.0
1,772,381	+		RR42_RS28595	0.82	-2.2
1,772,381	+		RR42_RS28595	0.82	-0.5
1,772,424	+		RR42_RS28595	0.85	-1.1
1,772,425	-		RR42_RS28595	0.85	-1.7
1,772,425	-		RR42_RS28595	0.85	-0.6
1,772,425	-		RR42_RS28595	0.85	-0.8
1,772,428	+		RR42_RS28595	0.85	-0.9
1,772,428	+		RR42_RS28595	0.85	-1.3
1,772,428	+		RR42_RS28595	0.85	-1.0
1,772,428	+		RR42_RS28595	0.85	-0.7
1,772,429	-		RR42_RS28595	0.85	-1.7
1,772,526	+		RR42_RS28595	0.90	-1.3
1,772,554	+				-0.2
1,772,554	+				-1.6
1,772,554	+				-0.7
1,772,555	-				+0.7
1,772,629	+				-1.6
1,772,629	+				-0.8
1,772,629	+				+0.9
1,772,630	-				-0.0
1,772,630	-				-1.5
1,772,630	-				+0.2
1,772,630	-				-1.1
1,772,630	-				-0.5
1,772,633	-				-1.0
1,772,633	-				-0.7
1,772,659	+				-1.3
1,772,660	-				-1.5
1,772,660	-				-2.2
1,772,719	+				-0.1
1,772,719	+				-1.5
1,772,748	+				+1.0
1,772,748	+				+1.5
1,772,799	+				+1.2
1,772,830	+		RR42_RS28600	0.15	+0.2
1,772,831	-		RR42_RS28600	0.15	-0.5
1,772,893	+		RR42_RS28600	0.29	-0.2
1,772,894	-		RR42_RS28600	0.29	-1.2
1,772,986	+		RR42_RS28600	0.49	+0.9
1,772,987	-		RR42_RS28600	0.49	-0.8
1,772,987	-		RR42_RS28600	0.49	-0.6
1,773,036	-		RR42_RS28600	0.60	+0.7
1,773,179	+				-1.1
1,773,180	-				-0.5
1,773,390	+				+0.4
1,773,390	+				-0.6
1,773,390	+				+0.8
1,773,390	+				+0.0
1,773,390	+				-0.9
1,773,390	+				-1.2
1,773,390	+				-0.1
1,773,391	-				-0.3
1,773,391	-				+0.1
1,773,391	-				-0.5
1,773,391	-				-0.3
1,773,391	-				+0.1
1,773,391	-				-2.3
1,773,393	-				-0.7
1,773,393	-				+0.1
1,773,393	-				+1.6
1,773,393	-				+1.6
1,773,393	-				+0.5
1,773,393	-				+0.5
1,773,477	+				+0.6
1,774,098	+		RR42_RS28605	0.40	+0.5
1,774,099	-		RR42_RS28605	0.40	+0.8
1,774,099	-		RR42_RS28605	0.40	+0.7
1,774,099	-		RR42_RS28605	0.40	+0.4