Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28575

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,765,536	+		RR42_RS28570	0.14	+0.2
1,765,536	+		RR42_RS28570	0.14	-1.6
1,765,536	+		RR42_RS28570	0.14	+0.4
1,765,537	-		RR42_RS28570	0.15	-0.2
1,765,712	+		RR42_RS28570	0.31	+0.2
1,765,926	+		RR42_RS28570	0.52	+0.2
1,765,938	+		RR42_RS28570	0.53	-0.6
1,765,950	+		RR42_RS28570	0.54	+1.0
1,765,951	-		RR42_RS28570	0.54	+0.4
1,766,089	-		RR42_RS28570	0.68	+1.1
1,766,089	-		RR42_RS28570	0.68	+0.4
1,766,189	+		RR42_RS28570	0.77	-0.3
1,766,189	+		RR42_RS28570	0.77	-1.6
1,766,189	+		RR42_RS28570	0.77	+0.6
1,766,189	+		RR42_RS28570	0.77	+0.6
1,766,190	-		RR42_RS28570	0.77	+1.2
1,766,190	-		RR42_RS28570	0.77	+0.5
1,766,190	-		RR42_RS28570	0.77	-1.2
1,766,190	-		RR42_RS28570	0.77	+0.7
1,766,190	-		RR42_RS28570	0.77	-0.8
1,766,190	-		RR42_RS28570	0.77	-0.7
1,766,190	-		RR42_RS28570	0.77	+0.3
1,766,238	+		RR42_RS28570	0.82	-0.2
1,766,238	+		RR42_RS28570	0.82	+0.2
1,766,239	-		RR42_RS28570	0.82	+0.8
1,766,239	-		RR42_RS28570	0.82	-0.1
1,766,239	-		RR42_RS28570	0.82	-0.7
1,766,239	-		RR42_RS28570	0.82	-0.9
1,766,421	+				-1.7
1,766,431	+				-0.4
1,766,540	+				-0.8
1,766,540	+				-2.5
1,766,540	+				-1.3
1,766,540	+				+0.6
1,766,540	+				+0.6
1,766,540	+				+0.3
1,766,541	-				+0.4
1,766,603	+		RR42_RS28575	0.13	-0.5
1,766,603	+		RR42_RS28575	0.13	-0.2
1,766,621	+		RR42_RS28575	0.15	-3.3
1,766,636	+		RR42_RS28575	0.16	-0.0
1,766,668	+		RR42_RS28575	0.19	-0.3
1,767,197	+		RR42_RS28575	0.63	-0.1
1,767,197	+		RR42_RS28575	0.63	-0.7
1,767,198	-		RR42_RS28575	0.63	+0.8
1,767,198	-		RR42_RS28575	0.63	-0.9
1,767,198	-		RR42_RS28575	0.63	-0.4
1,767,242	+		RR42_RS28575	0.67	+0.6
1,767,313	+		RR42_RS28575	0.72	-0.1
1,767,313	+		RR42_RS28575	0.72	-1.6
1,767,313	+		RR42_RS28575	0.72	+1.7
1,767,314	-		RR42_RS28575	0.73	-0.6
1,767,314	-		RR42_RS28575	0.73	+0.2
1,767,314	-		RR42_RS28575	0.73	-0.9
1,767,317	+		RR42_RS28575	0.73	-1.5
1,767,753	+				-0.2
1,767,754	-				-0.1
1,767,768	-				-0.6
1,767,781	+				-0.8
1,767,782	-				-0.1
1,767,782	-				+1.4
1,768,129	-		RR42_RS28580	0.21	+0.3
1,768,192	+		RR42_RS28580	0.28	+0.5
1,768,260	-		RR42_RS28580	0.35	+0.4
1,768,605	-		RR42_RS28580	0.73	-0.2