Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27730

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,583,723	+		RR42_RS27720	0.87	+0.2
1,583,725	+		RR42_RS27720	0.87	-0.6
1,583,725	+		RR42_RS27720	0.87	+0.1
1,583,725	+		RR42_RS27720	0.87	+0.4
1,583,816	+				-0.3
1,583,816	+				+0.6
1,583,816	+				+0.1
1,583,817	-				-1.4
1,584,292	+		RR42_RS27725	0.55	+0.3
1,584,537	+		RR42_RS27725	0.89	-0.4
1,584,539	+		RR42_RS27725	0.90	-1.1
1,584,540	-		RR42_RS27725	0.90	-1.5
1,584,540	-		RR42_RS27725	0.90	-0.5
1,584,666	+				+0.5
1,584,666	+				-1.1
1,584,667	-				+0.8
1,584,717	-				+2.1
1,584,803	+				+0.5
1,584,890	+		RR42_RS27730	0.18	+0.1
1,584,932	+		RR42_RS27730	0.23	+0.4
1,584,932	+		RR42_RS27730	0.23	+0.4
1,584,933	-		RR42_RS27730	0.23	+0.1
1,584,933	-		RR42_RS27730	0.23	+0.2
1,584,934	+		RR42_RS27730	0.23	+0.2
1,584,934	+		RR42_RS27730	0.23	-0.5
1,584,935	-		RR42_RS27730	0.23	-0.9
1,584,935	-		RR42_RS27730	0.23	-0.2
1,584,935	-		RR42_RS27730	0.23	-1.0
1,585,145	+		RR42_RS27730	0.45	+0.0
1,585,146	-		RR42_RS27730	0.45	-0.5
1,585,371	-		RR42_RS27730	0.68	+0.5
1,585,409	+		RR42_RS27730	0.72	-0.0
1,585,409	+		RR42_RS27730	0.72	-0.2
1,585,409	+		RR42_RS27730	0.72	+0.8
1,585,409	+		RR42_RS27730	0.72	-1.4
1,585,410	-		RR42_RS27730	0.72	+0.3
1,585,410	-		RR42_RS27730	0.72	-0.2
1,585,410	-		RR42_RS27730	0.72	+0.4
1,585,416	+		RR42_RS27730	0.73	+0.3
1,585,417	-		RR42_RS27730	0.73	+0.3
1,585,434	+		RR42_RS27730	0.75	+0.9
1,585,434	+		RR42_RS27730	0.75	+0.4
1,585,434	+		RR42_RS27730	0.75	-0.3
1,585,435	-		RR42_RS27730	0.75	-0.3
1,585,619	+				+0.2
1,585,839	+				+1.2
1,585,839	+				-1.0
1,585,840	-				-0.8
1,586,064	+		RR42_RS27735	0.22	+0.8
1,586,064	+		RR42_RS27735	0.22	+0.2
1,586,065	-		RR42_RS27735	0.22	+0.3
1,586,065	-		RR42_RS27735	0.22	+0.0
1,586,172	-		RR42_RS27735	0.37	-0.0
1,586,224	+		RR42_RS27735	0.44	-0.2
1,586,224	+		RR42_RS27735	0.44	-0.1
1,586,225	-		RR42_RS27735	0.44	+0.4
1,586,226	+		RR42_RS27735	0.44	-1.7
1,586,226	+		RR42_RS27735	0.44	+0.6
1,586,226	+		RR42_RS27735	0.44	+1.5
1,586,226	+		RR42_RS27735	0.44	+0.2
1,586,226	+		RR42_RS27735	0.44	+0.5
1,586,227	-		RR42_RS27735	0.44	+0.1
1,586,227	-		RR42_RS27735	0.44	+0.4
1,586,336	+		RR42_RS27735	0.59	+0.7
1,586,336	+		RR42_RS27735	0.59	+0.0
1,586,337	-		RR42_RS27735	0.59	-2.6
1,586,337	-		RR42_RS27735	0.59	+0.5
1,586,538	-		RR42_RS27735	0.87	-0.2
1,586,604	-				+0.1
1,586,604	-				+0.5