Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25965

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,169,964	+		RR42_RS25960	0.85	-0.2
1,169,964	+		RR42_RS25960	0.85	-0.0
1,169,965	-		RR42_RS25960	0.85	-0.5
1,169,965	-		RR42_RS25960	0.85	+0.0
1,169,965	-		RR42_RS25960	0.85	+0.5
1,170,361	+				+1.4
1,170,361	+				+1.4
1,170,362	-				+0.7
1,170,432	+				+0.3
1,170,432	+				-0.2
1,170,433	-				-0.4
1,170,433	-				-0.7
1,170,648	-				-0.4
1,170,648	-				-1.7
1,170,658	+				+0.5
1,170,658	+				+0.9
1,170,659	-				-0.5
1,170,659	-				-0.3
1,170,659	-				-0.7
1,170,718	+				-0.7
1,170,721	+				-0.6
1,170,722	-				+2.8
1,170,759	+				-0.4
1,170,759	+				+1.7
1,170,759	+				-0.9
1,170,786	+				+0.1
1,170,787	-				-0.4
1,170,807	+				-0.4
1,170,808	-				+0.4
1,171,209	-		RR42_RS25965	0.44	-0.5
1,171,209	-		RR42_RS25965	0.44	-0.6
1,171,209	-		RR42_RS25965	0.44	-0.3
1,171,217	-		RR42_RS25965	0.45	-0.5
1,171,217	-		RR42_RS25965	0.45	+0.2
1,171,592	-				-0.2
1,171,605	+				+1.0
1,171,641	+				+0.8
1,171,641	+				-0.5
1,172,003	+		RR42_RS25970	0.26	-0.1
1,172,004	-		RR42_RS25970	0.26	-1.9
1,172,196	-		RR42_RS25970	0.42	+0.7
1,172,324	+		RR42_RS25970	0.54	-1.4
1,172,325	-		RR42_RS25970	0.54	-1.1
1,172,508	+		RR42_RS25970	0.69	-0.8