Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25830

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,133,135	+		RR42_RS25825	0.31	+0.2
1,133,210	+		RR42_RS25825	0.39	+0.2
1,133,213	+		RR42_RS25825	0.40	-0.4
1,133,249	+		RR42_RS25825	0.43	-1.4
1,133,250	-		RR42_RS25825	0.43	+0.2
1,133,259	-		RR42_RS25825	0.44	-0.7
1,133,418	-		RR42_RS25825	0.61	+0.2
1,133,636	+		RR42_RS25825	0.84	-0.6
1,133,637	-		RR42_RS25825	0.84	-1.4
1,133,787	+				-1.4
1,133,807	+				+0.9
1,133,807	+				+0.4
1,133,845	+				-0.3
1,133,846	+				-0.1
1,133,846	+				+1.2
1,133,846	+				+0.3
1,133,846	+				+0.1
1,133,846	+				-1.8
1,133,847	-				-0.1
1,133,847	-				-0.0
1,133,847	-				+0.3
1,133,850	+				+1.1
1,133,850	+				+0.5
1,133,850	+				+0.1
1,133,862	+				-0.9
1,133,891	+				-0.6
1,133,891	+				+0.9
1,133,892	-				-0.2
1,133,899	-				-0.7
1,133,905	-				-0.8
1,133,914	-				+0.3
1,133,949	-				+0.3
1,133,996	-		RR42_RS25830	0.14	+0.6
1,134,313	-		RR42_RS25830	0.45	-0.4
1,134,313	-		RR42_RS25830	0.45	+2.0
1,134,378	+		RR42_RS25830	0.51	+0.1
1,134,378	+		RR42_RS25830	0.51	-0.3
1,134,451	+		RR42_RS25830	0.58	+0.1
1,134,452	-		RR42_RS25830	0.58	-0.2
1,134,453	+		RR42_RS25830	0.58	+0.3
1,134,453	+		RR42_RS25830	0.58	-0.2
1,134,454	-		RR42_RS25830	0.59	-1.4
1,134,454	-		RR42_RS25830	0.59	-0.1
1,134,454	-		RR42_RS25830	0.59	-0.7
1,134,454	-		RR42_RS25830	0.59	-0.4
1,134,454	-		RR42_RS25830	0.59	+0.5
1,134,801	+				+0.7
1,134,802	-				-1.8
1,134,802	-				-0.1
1,134,989	+				+0.3
1,134,990	-				-1.9
1,135,010	+				-0.2
1,135,010	+				-1.1
1,135,011	-				+1.8
1,135,011	-				+0.3
1,135,011	-				-0.1
1,135,023	-		RR42_RS25835	0.11	+1.0
1,135,023	-		RR42_RS25835	0.11	-1.7
1,135,023	-		RR42_RS25835	0.11	-0.2
1,135,095	-		RR42_RS25835	0.16	-0.2
1,135,104	-		RR42_RS25835	0.17	+0.6
1,135,104	-		RR42_RS25835	0.17	+0.2
1,135,130	+		RR42_RS25835	0.19	-1.4
1,135,130	+		RR42_RS25835	0.19	+1.5
1,135,181	-		RR42_RS25835	0.22	+1.7
1,135,371	-		RR42_RS25835	0.36	+1.9
1,135,692	+		RR42_RS25835	0.59	+0.7
1,135,693	-		RR42_RS25835	0.59	+0.9
1,135,693	-		RR42_RS25835	0.59	+0.1
1,135,693	-		RR42_RS25835	0.59	+0.3
1,135,693	-		RR42_RS25835	0.59	-0.6
1,135,866	+		RR42_RS25835	0.72	+1.3
1,135,867	-		RR42_RS25835	0.72	+1.8