Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25580

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,082,429	-				+1.1
1,082,429	-				+0.4
1,082,433	-				+0.8
1,082,449	+				-0.1
1,082,449	+				+0.1
1,082,449	+				+1.2
1,082,450	-				+0.6
1,082,450	-				-0.5
1,082,778	+		RR42_RS25575	0.44	-0.7
1,082,847	-		RR42_RS25575	0.53	+0.2
1,082,847	-		RR42_RS25575	0.53	+0.2
1,082,867	-		RR42_RS25575	0.56	-0.3
1,082,875	+		RR42_RS25575	0.57	+0.1
1,082,876	-		RR42_RS25575	0.57	+0.0
1,082,876	-		RR42_RS25575	0.57	-0.4
1,082,883	+		RR42_RS25575	0.58	-0.5
1,082,883	+		RR42_RS25575	0.58	-0.2
1,082,942	-		RR42_RS25575	0.66	-0.6
1,082,976	-		RR42_RS25575	0.70	+0.3
1,082,976	-		RR42_RS25575	0.70	-0.4
1,082,976	-		RR42_RS25575	0.70	-0.4
1,083,010	+		RR42_RS25575	0.75	-0.3
1,083,010	+		RR42_RS25575	0.75	+0.2
1,083,011	-		RR42_RS25575	0.75	-0.6
1,083,177	+				+0.1
1,083,328	-				-0.6
1,083,350	+				+0.1
1,083,350	+				-0.6
1,083,351	-				-0.1
1,083,431	+		RR42_RS25580	0.21	-0.2
1,083,432	-		RR42_RS25580	0.21	-0.6
1,083,432	-		RR42_RS25580	0.21	-1.4
1,083,668	-		RR42_RS25580	0.54	+0.8
1,083,705	+		RR42_RS25580	0.60	+0.0
1,083,746	+		RR42_RS25580	0.65	-0.5
1,083,746	+		RR42_RS25580	0.65	-0.9
1,083,747	-		RR42_RS25580	0.66	-0.1
1,083,875	+		RR42_RS25580	0.84	-0.5
1,083,875	+		RR42_RS25580	0.84	-0.1
1,083,876	-		RR42_RS25580	0.84	+0.2
1,083,876	-		RR42_RS25580	0.84	+0.1
1,084,116	+				-1.0
1,084,116	+				+0.5
1,084,117	-				+1.3
1,084,131	+				-0.7
1,084,199	+				+0.2
1,084,307	+				-0.2
1,084,308	-				-0.5
1,084,335	-				-0.3
1,084,453	+		RR42_RS25585	0.19	+0.5
1,084,453	+		RR42_RS25585	0.19	+0.6
1,084,728	-		RR42_RS25585	0.43	-0.2
1,084,750	+		RR42_RS25585	0.45	+0.1
1,084,887	-		RR42_RS25585	0.57	-0.2
1,084,920	-		RR42_RS25585	0.59	+0.6
1,084,920	-		RR42_RS25585	0.59	+0.2
1,084,989	-		RR42_RS25585	0.65	+0.4
1,084,989	-		RR42_RS25585	0.65	+0.4