Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20360

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
4,408,955	+		RR42_RS20355	0.85	-0.7
4,408,955	+		RR42_RS20355	0.85	-0.5
4,408,956	-		RR42_RS20355	0.85	+1.4
4,408,956	-		RR42_RS20355	0.85	+0.2
4,409,051	+		RR42_RS20355	0.87	-2.4
4,409,052	-		RR42_RS20355	0.87	-2.3
4,409,052	-		RR42_RS20355	0.87	-1.6
4,409,084	-		RR42_RS20355	0.87	-3.0
4,409,084	-		RR42_RS20355	0.87	-0.2
4,409,084	-		RR42_RS20355	0.87	+0.1
4,409,446	+				+0.8
4,409,447	-				+1.1
4,409,464	+				+0.3
4,409,465	-				-0.6
4,410,083	+		RR42_RS20360	0.32	+0.1
4,410,107	+		RR42_RS20360	0.37	-0.4
4,410,512	+				+0.5
4,410,513	-				+0.4
4,410,521	+				+1.2
4,410,592	+				-0.3
4,410,720	+				-0.9
4,410,860	-		RR42_RS20365	0.16	-0.4
4,410,862	-		RR42_RS20365	0.16	-0.3
4,410,862	-		RR42_RS20365	0.16	-0.2
4,410,895	+		RR42_RS20365	0.19	-1.7
4,410,896	-		RR42_RS20365	0.19	-1.5
4,410,896	-		RR42_RS20365	0.19	+0.2
4,411,216	+		RR42_RS20365	0.54	+0.2
4,411,216	+		RR42_RS20365	0.54	-1.5
4,411,216	+		RR42_RS20365	0.54	-0.5
4,411,216	+		RR42_RS20365	0.54	+0.8
4,411,217	-		RR42_RS20365	0.54	+1.1
4,411,217	-		RR42_RS20365	0.54	-0.9
4,411,217	-		RR42_RS20365	0.54	-0.1
4,411,217	-		RR42_RS20365	0.54	-0.4
4,411,217	-		RR42_RS20365	0.54	-0.1
4,411,294	+		RR42_RS20365	0.62	+0.1
4,411,295	-		RR42_RS20365	0.62	-0.8
4,411,342	+		RR42_RS20365	0.67	-0.5
4,411,381	+		RR42_RS20365	0.71	-1.4
4,411,382	-		RR42_RS20365	0.71	+0.5