Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17725

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,833,340	+				+0.7
3,833,340	+				+0.9
3,833,341	-				+1.0
3,833,929	+		RR42_RS17720	0.60	-1.2
3,833,930	-		RR42_RS17720	0.60	-0.6
3,834,071	-		RR42_RS17720	0.75	-0.9
3,834,243	+				+0.6
3,834,304	+				-0.4
3,834,328	+				-0.3
3,834,329	-				-2.5
3,834,422	+		RR42_RS17725	0.20	-0.3
3,834,422	+		RR42_RS17725	0.20	-1.0
3,834,422	+		RR42_RS17725	0.20	-2.0
3,834,422	+		RR42_RS17725	0.20	-0.5
3,834,422	+		RR42_RS17725	0.20	+0.5
3,834,422	+		RR42_RS17725	0.20	-0.5
3,834,422	+		RR42_RS17725	0.20	-0.4
3,834,423	-		RR42_RS17725	0.20	-1.0
3,834,423	-		RR42_RS17725	0.20	-0.1
3,834,424	+		RR42_RS17725	0.20	+0.3
3,834,425	-		RR42_RS17725	0.21	-0.5
3,834,425	-		RR42_RS17725	0.21	-1.0
3,834,425	-		RR42_RS17725	0.21	+1.1
3,834,795	-				-0.8
3,834,918	+				+0.5
3,835,212	+				-1.1
3,835,212	+				-0.3
3,835,598	+		RR42_RS17730	0.51	+2.1
3,835,598	+		RR42_RS17730	0.51	+1.7
3,835,646	+		RR42_RS17730	0.59	+1.6