Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16495

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,573,039	+		RR42_RS16490	0.11	+0.4
3,573,040	-		RR42_RS16490	0.11	-0.1
3,573,040	-		RR42_RS16490	0.11	-0.6
3,573,040	-		RR42_RS16490	0.11	-0.7
3,573,045	+		RR42_RS16490	0.12	-1.4
3,573,045	+		RR42_RS16490	0.12	+0.4
3,573,046	-		RR42_RS16490	0.12	+0.1
3,573,285	+		RR42_RS16490	0.38	+0.7
3,573,286	-		RR42_RS16490	0.38	-2.5
3,573,286	-		RR42_RS16490	0.38	-0.2
3,573,286	-		RR42_RS16490	0.38	-0.1
3,573,286	-		RR42_RS16490	0.38	+0.0
3,573,409	-		RR42_RS16490	0.51	-0.5
3,573,479	-		RR42_RS16490	0.59	-0.0
3,573,479	-		RR42_RS16490	0.59	-0.1
3,573,751	-		RR42_RS16490	0.88	+0.9
3,573,903	-				-0.8
3,573,903	-				-0.1
3,573,927	+				-1.2
3,573,928	-				+0.0
3,573,934	+				+1.6
3,573,934	+				-0.2
3,574,041	+				-0.7
3,574,234	+		RR42_RS16495	0.26	-0.9
3,574,292	-		RR42_RS16495	0.33	-0.7
3,574,460	-		RR42_RS16495	0.54	-0.2
3,574,528	-		RR42_RS16495	0.62	+0.3
3,574,811	-				+0.5
3,574,811	-				+0.3
3,574,882	+				-0.8
3,574,883	-				-0.7
3,575,126	+				+0.0
3,575,126	+				-0.0
3,575,126	+				-0.1
3,575,127	-				+2.5
3,575,127	-				-1.6
3,575,592	+		RR42_RS16500	0.49	+0.3
3,575,693	+		RR42_RS16500	0.58	-0.7
3,575,694	-		RR42_RS16500	0.59	-0.3
3,575,694	-		RR42_RS16500	0.59	+0.8
3,575,694	-		RR42_RS16500	0.59	+0.9