Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15695

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,391,038	-				+0.7
3,391,038	-				+0.8
3,391,042	-				+0.3
3,391,042	-				-0.8
3,391,151	+				-1.6
3,391,151	+				-0.8
3,391,151	+				-2.8
3,391,152	-				+2.0
3,391,153	+				-0.6
3,391,184	-				-0.7
3,391,323	+				-0.2
3,391,394	+				-0.2
3,391,549	+		RR42_RS15695	0.16	+0.2
3,391,549	+		RR42_RS15695	0.16	-0.7
3,391,549	+		RR42_RS15695	0.16	+0.0
3,391,549	+		RR42_RS15695	0.16	-0.7
3,391,658	+		RR42_RS15695	0.26	-0.7
3,391,678	+		RR42_RS15695	0.27	-0.5
3,391,721	+		RR42_RS15695	0.31	-1.0
3,391,722	-		RR42_RS15695	0.31	+0.8
3,391,722	-		RR42_RS15695	0.31	-0.7
3,391,722	-		RR42_RS15695	0.31	-1.0
3,391,722	-		RR42_RS15695	0.31	-0.8
3,392,642	-				-0.1
3,392,684	+		RR42_RS15700	0.13	-1.0
3,392,684	+		RR42_RS15700	0.13	+0.1
3,392,684	+		RR42_RS15700	0.13	-0.4
3,392,684	+		RR42_RS15700	0.13	+0.6
3,392,685	-		RR42_RS15700	0.13	+0.5
3,392,723	+		RR42_RS15700	0.16	-0.3
3,392,882	+		RR42_RS15700	0.28	-0.5
3,392,882	+		RR42_RS15700	0.28	-1.6
3,392,882	+		RR42_RS15700	0.28	-0.1
3,392,882	+		RR42_RS15700	0.28	-1.0
3,392,883	-		RR42_RS15700	0.28	-1.6
3,392,883	-		RR42_RS15700	0.28	-0.7
3,392,883	-		RR42_RS15700	0.28	-0.5
3,392,883	-		RR42_RS15700	0.28	+0.3
3,392,883	-		RR42_RS15700	0.28	-0.8
3,392,936	+		RR42_RS15700	0.32	-1.0
3,392,936	+		RR42_RS15700	0.32	+0.4
3,392,936	+		RR42_RS15700	0.32	+0.3
3,392,937	-		RR42_RS15700	0.32	+0.9
3,392,937	-		RR42_RS15700	0.32	-0.4
3,392,956	+		RR42_RS15700	0.33	-1.2
3,393,151	-		RR42_RS15700	0.48	-0.1
3,393,151	-		RR42_RS15700	0.48	+0.3
3,393,158	+		RR42_RS15700	0.49	-0.4
3,393,159	-		RR42_RS15700	0.49	+0.9
3,393,254	+		RR42_RS15700	0.56	-0.3
3,393,254	+		RR42_RS15700	0.56	-1.0
3,393,254	+		RR42_RS15700	0.56	-1.5
3,393,276	+		RR42_RS15700	0.58	+1.2
3,393,327	+		RR42_RS15700	0.62	+0.7
3,393,334	-		RR42_RS15700	0.62	+0.2
3,393,518	+		RR42_RS15700	0.76	-0.3