Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15385

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,325,656	-				+0.5
3,325,656	-				+2.2
3,325,834	-		RR42_RS15380	0.32	+0.3
3,325,989	+		RR42_RS15380	0.55	-0.5
3,325,990	-		RR42_RS15380	0.55	-0.1
3,325,990	-		RR42_RS15380	0.55	+0.6
3,325,990	-		RR42_RS15380	0.55	+0.7
3,325,990	-		RR42_RS15380	0.55	+1.5
3,325,990	-		RR42_RS15380	0.55	+0.7
3,326,209	-		RR42_RS15380	0.88	+0.5
3,326,438	+				+0.7
3,326,438	+				-0.9
3,326,438	+				-0.3
3,326,438	+				+0.1
3,326,438	+				-1.3
3,326,581	+		RR42_RS15385	0.19	+0.3
3,326,581	+		RR42_RS15385	0.19	+0.6
3,326,581	+		RR42_RS15385	0.19	+0.4
3,326,581	+		RR42_RS15385	0.19	+0.5
3,326,581	+		RR42_RS15385	0.19	+0.1
3,326,582	-		RR42_RS15385	0.19	-0.5
3,326,873	+		RR42_RS15385	0.42	+0.5
3,326,873	+		RR42_RS15385	0.42	+0.1
3,326,873	+		RR42_RS15385	0.42	-0.1
3,326,874	-		RR42_RS15385	0.42	+1.0
3,327,023	+		RR42_RS15385	0.54	+0.3
3,327,023	+		RR42_RS15385	0.54	-1.1
3,327,023	+		RR42_RS15385	0.54	+0.3
3,327,023	+		RR42_RS15385	0.54	+0.4
3,327,023	+		RR42_RS15385	0.54	-0.7
3,327,023	+		RR42_RS15385	0.54	-0.2
3,327,024	-		RR42_RS15385	0.54	+0.3
3,327,029	+		RR42_RS15385	0.55	+2.3
3,327,235	+		RR42_RS15385	0.71	-0.2
3,327,235	+		RR42_RS15385	0.71	-0.9
3,327,235	+		RR42_RS15385	0.71	+1.8
3,327,236	-		RR42_RS15385	0.71	+0.4
3,327,239	+		RR42_RS15385	0.71	+0.9
3,327,239	+		RR42_RS15385	0.71	-0.0
3,327,239	+		RR42_RS15385	0.71	+1.6
3,327,239	+		RR42_RS15385	0.71	-1.7
3,327,240	-		RR42_RS15385	0.71	-0.1
3,327,240	-		RR42_RS15385	0.71	-0.4
3,327,240	-		RR42_RS15385	0.71	-0.1
3,327,492	-				+0.1
3,327,492	-				-0.4
3,327,557	+				+0.1
3,327,557	+				-0.1
3,327,557	+				+0.9
3,327,557	+				+0.4
3,327,557	+				-0.3
3,327,558	-				+0.4
3,327,558	-				-0.7
3,327,558	-				+0.9
3,327,558	-				+0.5
3,327,993	+		RR42_RS15390	0.43	-0.5
3,327,994	-		RR42_RS15390	0.44	-0.1
3,328,030	-		RR42_RS15390	0.48	-1.0
3,328,144	-		RR42_RS15390	0.61	+0.6
3,328,296	+		RR42_RS15390	0.78	+1.0
3,328,296	+		RR42_RS15390	0.78	+0.2
3,328,297	-		RR42_RS15390	0.78	-0.3
3,328,297	-		RR42_RS15390	0.78	+1.0
3,328,297	-		RR42_RS15390	0.78	+1.9
3,328,297	-		RR42_RS15390	0.78	-0.5
3,328,297	-		RR42_RS15390	0.78	+0.6
3,328,303	+		RR42_RS15390	0.79	-0.4
3,328,304	-		RR42_RS15390	0.79	+0.4
3,328,304	-		RR42_RS15390	0.79	+0.4
3,328,422	+				+0.6
3,328,423	-				-0.1
3,328,423	-				+0.2
3,328,507	+				+1.0
3,328,508	-				+0.2
3,328,508	-				-0.4
3,328,508	-				+0.8