Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15110

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,270,485	-				+0.5
3,270,486	-				-0.1
3,270,506	+				+1.0
3,270,506	+				+0.4
3,270,507	-				-2.0
3,270,507	-				+0.6
3,270,565	-				+0.3
3,270,565	-				+0.6
3,270,565	-				-0.4
3,270,573	+				-0.3
3,270,578	+				+1.3
3,270,579	-				-0.7
3,270,751	-		RR42_RS15110	0.32	-2.5
3,270,751	-		RR42_RS15110	0.32	+0.3
3,270,751	-		RR42_RS15110	0.32	-2.8
3,270,801	+		RR42_RS15110	0.40	+0.5
3,270,801	+		RR42_RS15110	0.40	-1.4
3,270,802	-		RR42_RS15110	0.41	-0.6
3,270,802	-		RR42_RS15110	0.41	-2.0
3,270,838	-		RR42_RS15110	0.47	-0.5
3,271,002	+		RR42_RS15110	0.75	-0.7
3,271,037	-		RR42_RS15110	0.81	-1.0
3,271,134	+				-0.1
3,271,179	+				-0.8
3,271,179	+				-0.5
3,271,179	+				-0.6
3,271,179	+				-1.1
3,271,179	+				+0.9
3,271,179	+				+0.1
3,271,179	+				+1.5
3,271,179	+				-0.3
3,271,180	-				+0.9
3,271,180	-				+0.5
3,271,180	-				+0.4
3,271,180	-				-0.2
3,271,192	+				-0.4
3,271,193	-				+1.5
3,271,193	-				-0.6
3,271,195	-				+0.3
3,271,233	+				+1.0
3,271,313	+		RR42_RS15115	0.10	+0.6
3,271,313	+		RR42_RS15115	0.10	+0.9
3,271,313	+		RR42_RS15115	0.10	+1.1
3,271,313	+		RR42_RS15115	0.10	-2.0
3,271,313	+		RR42_RS15115	0.10	+0.3
3,271,313	+		RR42_RS15115	0.10	+0.1
3,271,313	+		RR42_RS15115	0.10	-0.3
3,271,314	-		RR42_RS15115	0.10	+0.1
3,271,315	+		RR42_RS15115	0.10	-0.0
3,271,315	+		RR42_RS15115	0.10	+0.3
3,271,315	+		RR42_RS15115	0.10	-0.5
3,271,316	-		RR42_RS15115	0.10	-0.4
3,271,316	-		RR42_RS15115	0.10	-0.6
3,271,520	+		RR42_RS15115	0.30	-0.1
3,271,565	-		RR42_RS15115	0.34	-0.1
3,271,795	+		RR42_RS15115	0.57	-0.4
3,271,982	+		RR42_RS15115	0.75	-0.3
3,271,983	-		RR42_RS15115	0.75	+0.3
3,271,983	-		RR42_RS15115	0.75	-1.1
3,272,015	-		RR42_RS15115	0.78	-1.1
3,272,147	-				-0.5