Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14620

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,144,014	-		RR42_RS14610	0.72	+0.0
3,144,040	+		RR42_RS14610	0.73	-0.0
3,144,041	-		RR42_RS14610	0.73	-0.1
3,144,041	-		RR42_RS14610	0.73	+0.6
3,144,361	+				+0.1
3,144,388	+				-0.9
3,144,388	+				-0.1
3,144,388	+				+1.3
3,144,389	-				+0.4
3,144,389	-				-0.1
3,144,389	-				-0.1
3,144,451	+				-0.5
3,144,451	+				+0.2
3,144,451	+				+0.5
3,144,451	+				+0.1
3,144,451	+				+2.2
3,144,451	+				+0.6
3,144,451	+				-0.4
3,144,451	+				-3.1
3,144,451	+				+1.8
3,144,451	+				-0.2
3,144,452	-				-1.5
3,144,452	-				+0.1
3,144,452	-				-0.2
3,144,452	-				-1.1
3,144,452	-				+0.9
3,144,452	-				+0.4
3,144,521	+				-0.1
3,144,522	-				-0.7
3,144,637	-		RR42_RS14615	0.13	+0.6
3,144,737	-		RR42_RS14615	0.37	-0.0
3,144,737	-		RR42_RS14615	0.37	-0.3
3,144,770	+		RR42_RS14615	0.45	-0.0
3,144,771	-		RR42_RS14615	0.45	+0.5
3,144,771	-		RR42_RS14615	0.45	+0.6
3,144,860	+		RR42_RS14615	0.66	-1.6
3,144,865	+		RR42_RS14615	0.67	-0.9
3,144,865	+		RR42_RS14615	0.67	-0.3
3,144,865	+		RR42_RS14615	0.67	-2.0
3,144,866	-		RR42_RS14615	0.67	-0.7
3,144,866	-		RR42_RS14615	0.67	-1.7
3,144,866	-		RR42_RS14615	0.67	-0.0
3,144,866	-		RR42_RS14615	0.67	+0.2
3,144,891	+		RR42_RS14615	0.73	-1.3
3,145,271	+		RR42_RS14620	0.72	+1.1
3,145,271	+		RR42_RS14620	0.72	-0.7
3,145,271	+		RR42_RS14620	0.72	-1.9
3,145,277	+		RR42_RS14620	0.74	+0.3
3,145,277	+		RR42_RS14620	0.74	-0.8
3,145,278	-		RR42_RS14620	0.74	+0.6
3,145,278	-		RR42_RS14620	0.74	-0.6
3,145,398	+				-0.1
3,145,443	+				+0.1
3,145,443	+				+0.2
3,145,443	+				-0.2
3,145,443	+				+0.8
3,145,444	-				-0.2
3,145,539	+		RR42_RS14625	0.17	-2.8
3,145,605	+		RR42_RS14625	0.24	-0.8
3,146,156	+		RR42_RS14625	0.82	-1.2
3,146,157	-		RR42_RS14625	0.83	+0.5