Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14240

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,060,769	-				+0.6
3,060,777	+				+0.3
3,060,778	-				+0.1
3,060,778	-				-0.0
3,060,808	-				+2.2
3,060,834	+				+0.6
3,060,834	+				+0.1
3,060,862	+				+0.0
3,060,862	+				+0.1
3,060,964	-				+0.2
3,060,964	-				+0.4
3,060,964	-				-0.8
3,060,975	+				+0.1
3,060,976	-				+0.7
3,060,976	-				-0.6
3,060,976	-				-0.1
3,060,976	-				+1.6
3,061,125	+				-1.5
3,061,158	+				+0.2
3,061,158	+				+0.6
3,061,159	-				+0.9
3,061,159	-				+0.7
3,061,159	-				-0.0
3,061,159	-				-1.0
3,061,159	-				-0.4
3,061,162	+				-0.9
3,061,162	+				-0.7
3,061,162	+				-0.6
3,061,162	+				+0.2
3,061,162	+				+0.4
3,061,163	-				+2.9
3,061,163	-				-0.5
3,061,163	-				+0.1
3,061,354	+				-0.5
3,061,354	+				+0.3
3,061,354	+				-0.1
3,061,354	+				+0.6
3,061,354	+				+0.3
3,061,355	-				+0.4
3,061,355	-				+0.2
3,061,355	-				+0.8
3,061,413	+				+1.1
3,061,414	-				-0.8
3,061,414	-				-1.1
3,061,507	-		RR42_RS14235	0.34	+0.4
3,061,827	+				-0.2
3,061,827	+				-0.8
3,061,848	+				-0.8
3,061,848	+				-0.9
3,061,849	-				-0.9
3,061,849	-				-0.4
3,061,849	-				+1.1
3,062,145	+		RR42_RS14240	0.18	-0.3
3,062,146	-		RR42_RS14240	0.18	-0.8
3,062,165	-		RR42_RS14240	0.19	+0.4
3,062,165	-		RR42_RS14240	0.19	+0.2
3,062,165	-		RR42_RS14240	0.19	-0.1
3,062,292	+		RR42_RS14240	0.25	-1.4
3,062,293	-		RR42_RS14240	0.25	-1.1
3,062,293	-		RR42_RS14240	0.25	-0.5
3,062,693	+		RR42_RS14240	0.44	+1.4
3,062,694	-		RR42_RS14240	0.44	+0.1
3,062,726	+		RR42_RS14240	0.45	+1.5
3,062,836	-		RR42_RS14240	0.51	-0.6
3,062,983	+		RR42_RS14240	0.58	-0.1
3,063,024	+		RR42_RS14240	0.60	-1.6
3,063,025	-		RR42_RS14240	0.60	+1.7
3,063,169	-		RR42_RS14240	0.66	-0.1
3,063,268	-		RR42_RS14240	0.71	-0.2
3,063,480	+		RR42_RS14240	0.81	+0.7
3,063,481	-		RR42_RS14240	0.81	+0.0
3,063,540	+		RR42_RS14240	0.84	-0.0
3,063,541	-		RR42_RS14240	0.84	+0.2
3,063,622	+		RR42_RS14240	0.88	-0.3
3,063,623	-		RR42_RS14240	0.88	+0.2
3,063,623	-		RR42_RS14240	0.88	-0.1
3,063,689	-				-0.3
3,063,780	+				+0.1
3,063,781	-				+0.6
3,063,781	-				+0.1
3,063,835	+				+0.6
3,063,836	-				-0.6
3,063,910	+				+0.1
3,063,910	+				-0.4
3,063,920	-				-1.3
3,063,935	+				-0.0
3,063,935	+				-0.5
3,063,936	-				+0.1
3,063,936	-				+2.2
3,063,940	+				-0.2
3,064,016	+				-0.3
3,064,499	+				-1.8
3,064,499	+				-0.8
3,064,500	-				-1.0
3,064,500	-				+1.1
3,064,500	-				+0.2
3,064,500	-				-0.2
3,064,500	-				+0.4
3,064,562	+		RR42_RS14250	0.12	-0.9
3,064,586	+		RR42_RS14250	0.14	-1.2
3,064,586	+		RR42_RS14250	0.14	-0.4
3,064,779	-		RR42_RS14250	0.32	-0.6