Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14080

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
3,029,382	-				+2.1
3,029,382	-		RR42_RS14070	0.81	-1.4
3,029,399	+		RR42_RS14070	0.82	-1.9
3,029,400	-		RR42_RS14070	0.82	-3.2
3,029,466	+		RR42_RS14070	0.88	-1.1
3,029,466	+		RR42_RS14070	0.88	-0.2
3,029,466	+		RR42_RS14070	0.88	-2.2
3,029,466	+		RR42_RS14070	0.88	-0.4
3,029,583	+				+1.4
3,029,583	+				-2.0
3,029,599	+				-0.7
3,029,600	-				-1.9
3,029,600	-				-1.6
3,029,701	+		RR42_RS14075	0.16	-0.8
3,029,701	+		RR42_RS14075	0.16	-3.3
3,029,701	+		RR42_RS14075	0.16	-0.0
3,030,079	+		RR42_RS14075	0.76	-0.6
3,030,079	+		RR42_RS14075	0.76	-1.1
3,030,079	+		RR42_RS14075	0.76	-1.3
3,030,079	+		RR42_RS14075	0.76	-0.9
3,030,079	+		RR42_RS14075	0.76	-1.9
3,030,079	+		RR42_RS14075	0.76	-0.9
3,030,080	-		RR42_RS14075	0.77	-0.2
3,030,080	-		RR42_RS14075	0.77	+2.1
3,030,080	-		RR42_RS14075	0.77	-2.2
3,030,135	+		RR42_RS14075	0.85	-0.4
3,030,135	+		RR42_RS14075	0.85	-0.7
3,030,135	+		RR42_RS14075	0.85	-1.2
3,030,136	-		RR42_RS14075	0.85	-2.2
3,030,212	+				-1.5
3,030,212	+				-2.2
3,030,212	+				+2.1
3,030,212	+				+0.3
3,030,213	-				-0.9
3,030,271	+				-2.2
3,030,329	+				-0.9
3,030,330	-				-1.2
3,030,334	-				-1.3
3,030,340	+				-3.2
3,030,346	+				-1.6
3,030,347	-				+0.3
3,030,351	-				+0.0
3,030,351	-				-2.0
3,030,351	-				-0.9
3,030,356	+				-1.2
3,030,357	-				-0.7
3,030,363	+				-1.3
3,030,490	-		RR42_RS14080	0.21	-2.6
3,030,587	-		RR42_RS14080	0.38	-1.1
3,030,607	+		RR42_RS14080	0.41	-2.1
3,030,608	-		RR42_RS14080	0.41	-1.8
3,030,613	+		RR42_RS14080	0.42	-1.3
3,030,614	-		RR42_RS14080	0.42	-1.9
3,030,614	-		RR42_RS14080	0.42	-2.9
3,030,621	-		RR42_RS14080	0.43	-4.1
3,030,621	-		RR42_RS14080	0.43	-3.4
3,030,705	+		RR42_RS14080	0.57	-2.9
3,030,705	+		RR42_RS14080	0.57	-3.2
3,030,705	+		RR42_RS14080	0.57	-2.0
3,030,705	+		RR42_RS14080	0.57	-3.9
3,030,706	-		RR42_RS14080	0.57	-3.3
3,030,706	-		RR42_RS14080	0.57	-3.2
3,030,747	+		RR42_RS14080	0.64	-4.6
3,030,786	+		RR42_RS14080	0.71	-1.8
3,030,787	-		RR42_RS14080	0.71	-1.9
3,030,787	-		RR42_RS14080	0.71	-4.6
3,030,876	+		RR42_RS14080	0.86	-2.2
3,030,877	-		RR42_RS14080	0.86	-3.5
3,030,877	-		RR42_RS14080	0.86	-1.8
3,030,966	-				-1.2
3,030,966	-				-3.6
3,030,981	+				-2.5
3,030,982	-				+0.3
3,030,982	-				+0.6
3,030,982	-				-2.0
3,031,014	+				+0.6
3,031,024	-				+2.0
3,031,024	-				+1.6
3,031,024	-				+3.4
3,031,024	-				+1.0
3,031,060	+				-3.7
3,031,061	-				+2.3
3,031,061	-				+3.4
3,031,061	-				+1.3
3,031,081	+				-3.2
3,031,082	-				+3.3
3,031,138	+		RR42_RS14085	0.10	-1.9
3,031,139	-		RR42_RS14085	0.11	+1.5
3,031,304	-		RR42_RS14085	0.47	+2.8
3,031,304	-		RR42_RS14085	0.47	+1.9
3,031,304	-		RR42_RS14085	0.47	+1.8
3,031,304	-		RR42_RS14085	0.47	+1.3
3,031,359	+		RR42_RS14085	0.59	-1.0
3,031,360	-		RR42_RS14085	0.59	+1.3
3,031,363	+		RR42_RS14085	0.60	-2.2
3,031,363	+		RR42_RS14085	0.60	-3.3
3,031,363	+		RR42_RS14085	0.60	-1.6