Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13640

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,943,437	-		RR42_RS13635	0.37	+0.5
2,943,437	-		RR42_RS13635	0.37	-1.8
2,943,580	+		RR42_RS13635	0.52	-0.3
2,943,580	+		RR42_RS13635	0.52	-0.8
2,943,580	+		RR42_RS13635	0.52	+0.3
2,943,581	-		RR42_RS13635	0.52	-1.0
2,943,716	-		RR42_RS13635	0.66	-2.1
2,943,716	-		RR42_RS13635	0.66	+0.2
2,943,898	+		RR42_RS13635	0.84	+0.0
2,943,898	+		RR42_RS13635	0.84	-0.0
2,944,054	+				-0.9
2,944,054	+				-2.1
2,944,055	-				-0.3
2,944,055	-				-0.2
2,944,204	+				-1.0
2,944,204	+				-0.3
2,944,205	-				-1.1
2,944,207	+				-0.9
2,944,207	+				-0.1
2,944,207	+				-0.5
2,944,207	+				+1.8
2,944,208	-				-0.6
2,944,255	+				-1.1
2,944,256	-				+0.4
2,944,256	-				+0.1
2,944,256	-				-0.4
2,944,275	-				+0.5
2,944,320	+				-0.4
2,944,566	+		RR42_RS13640	0.32	+1.2
2,944,567	-		RR42_RS13640	0.32	+0.4
2,944,878	+		RR42_RS13640	0.85	+0.6
2,944,960	-				+0.5
2,945,020	-				-0.6
2,945,260	-		RR42_RS13645	0.15	-1.1
2,945,274	+		RR42_RS13645	0.16	-0.5
2,945,275	-		RR42_RS13645	0.16	+0.4
2,945,280	+		RR42_RS13645	0.16	-0.3
2,945,291	-		RR42_RS13645	0.17	+0.1
2,945,343	+		RR42_RS13645	0.21	-0.9
2,945,526	+		RR42_RS13645	0.33	+0.1
2,945,526	+		RR42_RS13645	0.33	-0.2
2,945,538	+		RR42_RS13645	0.34	-0.1
2,945,539	-		RR42_RS13645	0.34	+0.6
2,945,568	+		RR42_RS13645	0.36	-0.2
2,945,623	+		RR42_RS13645	0.40	-0.1
2,945,625	+		RR42_RS13645	0.40	-0.4
2,945,625	+		RR42_RS13645	0.40	+1.1
2,945,625	+		RR42_RS13645	0.40	-0.2
2,945,625	+		RR42_RS13645	0.40	+0.4
2,945,626	-		RR42_RS13645	0.40	+2.5
2,945,693	+		RR42_RS13645	0.45	-1.2
2,945,693	+		RR42_RS13645	0.45	-0.6
2,945,694	-		RR42_RS13645	0.45	-1.1
2,945,856	+		RR42_RS13645	0.56	-0.3
2,945,857	-		RR42_RS13645	0.56	+0.5
2,945,940	+		RR42_RS13645	0.61	-1.2
2,945,943	-		RR42_RS13645	0.62	+1.3
2,945,943	-		RR42_RS13645	0.62	+0.9