Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13615

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,937,617	-				-0.1
2,937,729	+		RR42_RS13610	0.18	+0.2
2,937,730	-		RR42_RS13610	0.18	+1.2
2,938,007	+		RR42_RS13610	0.52	+0.2
2,938,008	-		RR42_RS13610	0.52	+0.1
2,938,072	+		RR42_RS13610	0.60	-0.9
2,938,072	+		RR42_RS13610	0.60	+0.3
2,938,073	-		RR42_RS13610	0.60	+0.3
2,938,142	-		RR42_RS13610	0.68	+0.1
2,938,161	+		RR42_RS13610	0.71	-0.9
2,938,360	+				+0.6
2,938,360	+				-0.3
2,938,360	+				-0.2
2,938,360	+				-0.2
2,938,361	-				-0.3
2,938,361	-				-0.3
2,938,361	-				+0.5
2,938,361	-				+0.2
2,938,380	-				+0.8
2,938,406	+				+0.3
2,938,406	+				-0.5
2,938,407	-				-0.3
2,938,423	-				-1.1
2,938,438	-				-1.4
2,938,438	-				+0.1
2,938,530	+				+1.0
2,938,530	+				+0.1
2,938,531	-				-0.3
2,938,532	+				+0.1
2,938,532	+				-0.6
2,938,533	-				-0.9
2,938,548	+				-0.6
2,938,548	+				-0.3
2,938,595	+				-0.3
2,938,596	-				-0.3
2,938,596	-				-0.1
2,938,686	+		RR42_RS13615	0.13	-0.6
2,938,687	-		RR42_RS13615	0.13	-0.9
2,938,687	-		RR42_RS13615	0.13	+0.3
2,938,771	+		RR42_RS13615	0.24	-1.1
2,938,772	-		RR42_RS13615	0.24	-0.2
2,939,145	+		RR42_RS13615	0.71	-0.6
2,939,153	+		RR42_RS13615	0.72	-1.0
2,939,153	+		RR42_RS13615	0.72	-0.3
2,939,154	-				+1.5
2,939,154	-		RR42_RS13615	0.72	+0.7
2,939,154	-		RR42_RS13615	0.72	+1.2
2,939,240	+		RR42_RS13615	0.83	+0.0
2,939,240	+		RR42_RS13615	0.83	-0.1
2,939,241	-		RR42_RS13615	0.83	-0.2
2,939,241	-		RR42_RS13615	0.83	-0.1
2,939,241	-		RR42_RS13615	0.83	-0.5
2,939,529	+		RR42_RS13620	0.35	+0.2
2,939,847	+				+0.4
2,939,916	+				-1.3
2,940,092	-		RR42_RS13625	0.28	-0.4
2,940,168	+		RR42_RS13625	0.37	-0.5
2,940,246	+		RR42_RS13625	0.46	+1.8
2,940,247	-		RR42_RS13625	0.46	-0.0
2,940,363	+		RR42_RS13625	0.60	-1.2