Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13375

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,884,158	-		RR42_RS13370	0.46	+0.3
2,884,199	-		RR42_RS13370	0.48	+0.1
2,884,256	+		RR42_RS13370	0.52	-1.9
2,884,256	+		RR42_RS13370	0.52	+1.5
2,884,417	+		RR42_RS13370	0.62	+0.4
2,884,418	-		RR42_RS13370	0.62	-1.1
2,884,811	+		RR42_RS13370	0.86	+0.2
2,885,171	+				+1.1
2,885,172	-				+0.7
2,885,229	+		RR42_RS13375	0.12	+0.3
2,885,230	-		RR42_RS13375	0.13	+2.6
2,885,230	-		RR42_RS13375	0.13	+0.2
2,885,232	+		RR42_RS13375	0.13	+1.8
2,885,233	-		RR42_RS13375	0.13	+1.3
2,885,480	-		RR42_RS13375	0.35	+1.2
2,885,480	-		RR42_RS13375	0.35	+2.6
2,885,500	+		RR42_RS13375	0.37	+1.6
2,885,611	+		RR42_RS13375	0.46	-0.5
2,885,611	+		RR42_RS13375	0.46	+0.3
2,885,768	-		RR42_RS13375	0.60	+0.8
2,885,768	-		RR42_RS13375	0.60	+2.0
2,885,875	+		RR42_RS13375	0.70	-1.2
2,885,936	+		RR42_RS13375	0.75	+1.4
2,885,996	-		RR42_RS13375	0.80	+2.0
2,885,996	-		RR42_RS13375	0.80	+0.5
2,885,996	-		RR42_RS13375	0.80	-0.5
2,886,016	+		RR42_RS13375	0.82	+0.6
2,886,031	+		RR42_RS13375	0.84	+0.6
2,886,032	-		RR42_RS13375	0.84	-1.7
2,886,259	-				-0.8
2,886,310	-				+0.4
2,886,333	+		RR42_RS13380	0.11	-0.0
2,886,537	+		RR42_RS13380	0.31	-0.5
2,886,537	+		RR42_RS13380	0.31	+0.9
2,886,538	-		RR42_RS13380	0.31	+1.0
2,886,581	-		RR42_RS13380	0.35	+0.4
2,886,642	+		RR42_RS13380	0.41	+0.0
2,886,643	-		RR42_RS13380	0.41	+1.5
2,886,780	+		RR42_RS13380	0.54	+2.4
2,886,958	-		RR42_RS13380	0.71	-0.3
2,887,006	-		RR42_RS13380	0.75	+0.3
2,887,006	-		RR42_RS13380	0.75	+0.1
2,887,036	-		RR42_RS13380	0.78	-1.0
2,887,036	-		RR42_RS13380	0.78	+1.0
2,887,204	+				+0.3
2,887,205	-				+0.5
2,887,205	-				+2.9