Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12610

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,707,834	-				-0.2
2,707,834	-				+0.4
2,707,910	+				-0.3
2,707,911	-				-0.1
2,707,911	-				+0.9
2,707,912	+				+0.1
2,707,912	+				+0.1
2,707,912	+				-0.3
2,707,913	-				-0.0
2,707,913	-				-0.5
2,708,152	+		RR42_RS12610	0.33	+0.6
2,708,152	+		RR42_RS12610	0.33	+0.6
2,708,152	+		RR42_RS12610	0.33	-0.8
2,708,543	+		RR42_RS12610	0.73	+0.3
2,708,544	-		RR42_RS12610	0.73	+2.4
2,708,633	+		RR42_RS12610	0.82	+2.1
2,708,634	-		RR42_RS12610	0.82	+0.3
2,708,634	-		RR42_RS12610	0.82	+1.0
2,708,637	+		RR42_RS12610	0.82	+0.1
2,708,637	+		RR42_RS12610	0.82	-0.3
2,708,638	-		RR42_RS12610	0.82	+0.7
2,708,638	-		RR42_RS12610	0.82	+1.8
2,708,638	-		RR42_RS12610	0.82	+0.3
2,708,745	-				-0.2
2,708,745	-				-0.6
2,708,890	-				+0.2
2,708,890	-				-0.1
2,709,386	+		RR42_RS12615	0.52	+1.6
2,709,386	+		RR42_RS12615	0.52	+1.3
2,709,766	-				+0.1
2,709,778	+				-0.1
2,709,779	-				+0.3
2,709,804	+				-0.3
2,709,804	+				+0.3
2,709,805	-				+0.6
2,709,805	-				+1.7