Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11455

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,450,516	+				+0.0
2,450,689	+		RR42_RS11450	0.28	-0.5
2,450,785	+		RR42_RS11450	0.39	-0.5
2,450,786	-		RR42_RS11450	0.39	+0.2
2,450,786	-		RR42_RS11450	0.39	+0.6
2,450,807	+		RR42_RS11450	0.41	+0.6
2,450,807	+		RR42_RS11450	0.41	+0.3
2,450,807	+		RR42_RS11450	0.41	-0.5
2,450,808	-		RR42_RS11450	0.41	-1.2
2,450,808	-		RR42_RS11450	0.41	+2.2
2,450,817	+		RR42_RS11450	0.42	+0.9
2,450,830	-		RR42_RS11450	0.43	+0.0
2,451,275	+				+0.2
2,451,275	+				-0.9
2,451,275	+				-1.0
2,451,275	+				-0.2
2,451,275	+				+0.1
2,451,276	-				+0.4
2,451,276	-				-0.1
2,451,276	-				+0.3
2,451,276	-				+0.2
2,451,276	-				-1.0
2,451,276	-				+0.4
2,451,658	+		RR42_RS11455	0.29	+0.7
2,451,783	-		RR42_RS11455	0.42	+0.9
2,451,973	+		RR42_RS11455	0.63	-0.0
2,451,974	-		RR42_RS11455	0.63	+0.2
2,452,379	+				-0.0
2,452,379	+				+0.1
2,452,383	+				+1.2
2,452,383	+				+0.9
2,452,383	+				+0.1
2,452,383	+				-0.6
2,452,383	+				-0.7
2,452,384	-				-0.0
2,452,384	-				+0.5
2,452,384	-				-0.0
2,452,384	-				+0.5
2,452,384	-				-0.2
2,452,437	-				+0.6
2,452,462	+				+0.6
2,452,463	-				-0.3
2,452,463	-				-1.1
2,452,463	-				-0.1
2,452,584	+				-0.0
2,452,599	+				+0.8
2,452,599	+				+0.0
2,452,599	+				+0.9
2,452,600	-				+1.3
2,452,923	-		RR42_RS11460	0.36	+0.7
2,452,988	+		RR42_RS11460	0.43	-1.3
2,452,989	-		RR42_RS11460	0.43	+1.2
2,452,989	-		RR42_RS11460	0.43	+0.5
2,453,100	-		RR42_RS11460	0.55	+0.5
2,453,183	+		RR42_RS11460	0.64	+1.2
2,453,183	+		RR42_RS11460	0.64	+0.5
2,453,184	-		RR42_RS11460	0.64	+1.0
2,453,184	-		RR42_RS11460	0.64	+0.4
2,453,244	+		RR42_RS11460	0.71	+1.4
2,453,245	-		RR42_RS11460	0.71	-1.5
2,453,245	-		RR42_RS11460	0.71	-0.0
2,453,245	-		RR42_RS11460	0.71	-2.1
2,453,245	-		RR42_RS11460	0.71	+0.6
2,453,245	-		RR42_RS11460	0.71	-0.7