Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11195

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,390,210	+		RR42_RS11190	0.47	+0.7
2,390,211	-		RR42_RS11190	0.47	+1.2
2,390,211	-		RR42_RS11190	0.47	+0.8
2,390,317	+		RR42_RS11190	0.54	-0.5
2,390,317	+		RR42_RS11190	0.54	-0.2
2,390,318	-		RR42_RS11190	0.54	-0.0
2,390,318	-		RR42_RS11190	0.54	+1.1
2,390,318	-		RR42_RS11190	0.54	+1.9
2,390,318	-		RR42_RS11190	0.54	+0.5
2,390,318	-		RR42_RS11190	0.54	+0.1
2,390,318	-		RR42_RS11190	0.54	+0.1
2,390,318	-		RR42_RS11190	0.54	+1.4
2,390,318	-		RR42_RS11190	0.54	+3.1
2,390,318	-		RR42_RS11190	0.54	+0.1
2,390,320	-		RR42_RS11190	0.54	+0.2
2,390,329	-		RR42_RS11190	0.55	+1.3
2,390,386	+		RR42_RS11190	0.58	+0.7
2,390,641	+		RR42_RS11190	0.74	+0.6
2,391,009	+				-0.1
2,391,236	+		RR42_RS11195	0.11	+0.6
2,391,237	-		RR42_RS11195	0.11	+0.2
2,391,336	-		RR42_RS11195	0.19	+0.6
2,391,372	+		RR42_RS11195	0.22	+0.1
2,391,372	+		RR42_RS11195	0.22	+0.7
2,391,387	+		RR42_RS11195	0.24	-0.8
2,391,387	+		RR42_RS11195	0.24	-1.2
2,391,387	+		RR42_RS11195	0.24	+0.5
2,391,387	+		RR42_RS11195	0.24	+0.6
2,391,387	+		RR42_RS11195	0.24	-1.0
2,391,388	-		RR42_RS11195	0.24	+0.7
2,391,405	+		RR42_RS11195	0.25	+1.4
2,391,405	+		RR42_RS11195	0.25	-1.2
2,391,406	-		RR42_RS11195	0.25	-0.7
2,391,407	+		RR42_RS11195	0.25	-0.8
2,391,470	+		RR42_RS11195	0.31	-1.8
2,391,470	+		RR42_RS11195	0.31	+0.6
2,391,471	-		RR42_RS11195	0.31	+0.3
2,391,588	+		RR42_RS11195	0.40	-0.7
2,391,589	-		RR42_RS11195	0.40	-0.3
2,391,827	+		RR42_RS11195	0.60	+0.0
2,391,827	+		RR42_RS11195	0.60	-0.1
2,391,827	+		RR42_RS11195	0.60	-0.2
2,391,827	+		RR42_RS11195	0.60	-0.0
2,391,828	-		RR42_RS11195	0.60	+0.3
2,391,828	-		RR42_RS11195	0.60	+0.7
2,391,833	+		RR42_RS11195	0.60	+0.8
2,391,833	+		RR42_RS11195	0.60	-0.4
2,391,833	+		RR42_RS11195	0.60	-1.8
2,391,833	+		RR42_RS11195	0.60	+0.6
2,391,834	-		RR42_RS11195	0.61	-0.1
2,391,834	-		RR42_RS11195	0.61	+2.1
2,391,834	-		RR42_RS11195	0.61	-0.7
2,391,834	-		RR42_RS11195	0.61	+0.2
2,391,834	-		RR42_RS11195	0.61	-0.2
2,392,327	-				+1.7
2,392,338	-				-0.3
2,392,338	-				+0.7
2,392,371	+				-0.9
2,392,372	-				-0.2
2,392,372	-				-0.3
2,392,606	+		RR42_RS11200	0.19	-1.1
2,392,607	-		RR42_RS11200	0.20	+0.6
2,392,607	-		RR42_RS11200	0.20	-1.0
2,392,607	-		RR42_RS11200	0.20	-0.0
2,392,633	+		RR42_RS11200	0.23	-1.5
2,392,634	-		RR42_RS11200	0.23	+0.5
2,392,704	+		RR42_RS11200	0.33	+0.4
2,392,705	-		RR42_RS11200	0.33	+0.8
2,392,705	-		RR42_RS11200	0.33	-0.3
2,392,705	-		RR42_RS11200	0.33	+0.9
2,392,708	+		RR42_RS11200	0.34	-2.6
2,392,975	+		RR42_RS11200	0.72	-0.8
2,392,976	-		RR42_RS11200	0.72	+0.5
2,393,204	+				-0.0
2,393,204	+				-0.1
2,393,224	+				+0.3
2,393,225	-				-1.7
2,393,246	-				-0.4
2,393,295	-				-0.0