Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11170

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,386,015	+		RR42_RS11160	0.88	+0.5
2,386,015	+		RR42_RS11160	0.88	-0.1
2,386,015	+		RR42_RS11160	0.88	-0.5
2,386,141	+				-0.1
2,386,141	+				+0.9
2,386,223	+				-0.0
2,386,464	+		RR42_RS11165	0.29	-0.0
2,386,464	+		RR42_RS11165	0.29	+0.5
2,386,464	+		RR42_RS11165	0.29	-0.7
2,386,465	-		RR42_RS11165	0.29	-1.2
2,386,539	+		RR42_RS11165	0.46	-0.6
2,386,540	-		RR42_RS11165	0.46	+0.4
2,387,389	+				+0.5
2,387,603	-		RR42_RS11175	0.40	+1.1
2,387,668	+		RR42_RS11175	0.61	+0.6
2,387,668	+		RR42_RS11175	0.61	+1.1
2,387,668	+		RR42_RS11175	0.61	+0.9
2,387,668	+		RR42_RS11175	0.61	+1.1
2,387,669	-		RR42_RS11175	0.61	+0.3
2,388,101	+		RR42_RS11180	0.38	-1.1
2,388,101	+		RR42_RS11180	0.38	+0.5
2,388,102	-		RR42_RS11180	0.39	-0.8
2,388,147	-		RR42_RS11180	0.44	-0.1
2,388,186	-		RR42_RS11180	0.49	+0.3
2,388,347	+		RR42_RS11180	0.69	+0.2
2,388,347	+		RR42_RS11180	0.69	-1.5
2,388,347	+		RR42_RS11180	0.69	+0.1