Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11090

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,365,672	-		RR42_RS11085	0.60	-0.9
2,365,713	+		RR42_RS11085	0.63	+0.4
2,365,949	-		RR42_RS11085	0.83	+0.3
2,366,113	+				+0.7
2,366,161	+				-0.1
2,366,162	-				-0.3
2,366,171	-				+0.3
2,366,217	+				+1.0
2,366,218	-				+1.5
2,366,218	-				+2.1
2,366,442	-		RR42_RS11090	0.26	+1.3
2,366,547	-		RR42_RS11090	0.43	+0.6
2,366,550	+		RR42_RS11090	0.43	-1.9
2,366,551	-		RR42_RS11090	0.43	+0.3
2,366,916	+				-0.8
2,366,916	+				-0.7
2,367,076	-				+0.1
2,367,076	-				-0.2
2,367,088	-				+0.6
2,367,135	+				+0.7
2,367,184	-				+1.4
2,367,384	+		RR42_RS11095	0.18	-1.0
2,367,384	+		RR42_RS11095	0.18	+0.5
2,367,385	-		RR42_RS11095	0.18	+0.2
2,367,385	-		RR42_RS11095	0.18	-0.1
2,367,417	+		RR42_RS11095	0.20	-1.8
2,367,613	-		RR42_RS11095	0.29	-0.3
2,367,630	+		RR42_RS11095	0.30	+0.1
2,367,655	+		RR42_RS11095	0.31	+0.2