Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10775

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,302,666	+		RR42_RS10770	0.53	+0.4
2,302,667	-		RR42_RS10770	0.53	+0.5
2,302,667	-		RR42_RS10770	0.53	+0.3
2,302,667	-		RR42_RS10770	0.53	+0.6
2,302,667	-		RR42_RS10770	0.53	-0.1
2,302,744	+		RR42_RS10770	0.57	-1.2
2,302,745	-		RR42_RS10770	0.57	+0.5
2,302,745	-		RR42_RS10770	0.57	+0.6
2,302,762	+		RR42_RS10770	0.58	-0.1
2,302,923	+		RR42_RS10770	0.67	+0.2
2,302,923	+		RR42_RS10770	0.67	+1.0
2,302,923	+		RR42_RS10770	0.67	+0.5
2,302,923	+		RR42_RS10770	0.67	-0.5
2,302,923	+		RR42_RS10770	0.67	-0.6
2,302,924	-		RR42_RS10770	0.67	+0.1
2,302,924	-		RR42_RS10770	0.67	-0.5
2,302,924	-		RR42_RS10770	0.67	-0.1
2,302,938	+		RR42_RS10770	0.67	+0.0
2,302,938	+		RR42_RS10770	0.67	-0.0
2,302,939	-		RR42_RS10770	0.67	+0.0
2,303,051	-		RR42_RS10770	0.73	+0.2
2,303,164	+		RR42_RS10770	0.80	+1.4
2,303,164	+		RR42_RS10770	0.80	-0.1
2,303,165	-		RR42_RS10770	0.80	+1.0
2,303,193	-		RR42_RS10770	0.81	-0.2
2,303,278	+		RR42_RS10770	0.86	-1.0
2,303,359	+		RR42_RS10770	0.90	-0.4
2,303,359	+		RR42_RS10770	0.90	+1.7
2,303,396	+				+1.3
2,303,397	-				-0.7
2,303,397	-				-0.6
2,303,398	+				-0.4
2,303,398	+				-1.8
2,303,399	-				+1.5
2,303,399	-				-1.0
2,303,399	-				+0.5
2,303,399	-				-0.5
2,303,472	+				-0.8
2,303,472	+				-0.6
2,303,472	+				-0.3
2,303,472	+				-0.3
2,303,473	-				+1.0
2,303,552	+				-2.9
2,303,553	-				-0.7
2,303,553	-				-0.2
2,303,553	-				+0.4
2,303,553	-				-0.9
2,303,553	-				-0.6
2,303,568	+				-0.3
2,303,568	+				-0.3
2,303,568	+				-0.5
2,303,750	+		RR42_RS10775	0.13	+0.6
2,303,919	-		RR42_RS10775	0.26	+0.1
2,303,981	+		RR42_RS10775	0.30	+0.2
2,303,987	+		RR42_RS10775	0.31	+1.5
2,303,987	+		RR42_RS10775	0.31	+1.1
2,303,988	-		RR42_RS10775	0.31	-0.5
2,303,988	-		RR42_RS10775	0.31	-0.7
2,304,029	+		RR42_RS10775	0.34	+0.4
2,304,029	+		RR42_RS10775	0.34	+0.6
2,304,029	+		RR42_RS10775	0.34	-0.3
2,304,133	-		RR42_RS10775	0.42	-0.4
2,304,141	-		RR42_RS10775	0.43	+1.1
2,304,295	-		RR42_RS10775	0.54	+0.5
2,304,295	-		RR42_RS10775	0.54	+0.5
2,304,332	+		RR42_RS10775	0.57	+0.1
2,304,332	+		RR42_RS10775	0.57	-0.1
2,304,332	+		RR42_RS10775	0.57	+1.5
2,304,497	+		RR42_RS10775	0.70	+1.0
2,304,498	-		RR42_RS10775	0.70	+0.9
2,304,498	-		RR42_RS10775	0.70	+0.2
2,304,503	+		RR42_RS10775	0.70	+0.4
2,304,504	-		RR42_RS10775	0.70	-0.6
2,304,506	-		RR42_RS10775	0.71	+0.5
2,304,506	-		RR42_RS10775	0.71	-1.0
2,304,548	+		RR42_RS10775	0.74	-0.2
2,304,563	+		RR42_RS10775	0.75	-0.3
2,304,672	-		RR42_RS10775	0.83	-0.3
2,304,838	+				+2.0
2,305,225	+				-0.3
2,305,225	+				-2.4
2,305,225	+				+0.8
2,305,225	+				+0.1
2,305,226	-				-0.1
2,305,226	-				+0.3
2,305,226	-				+0.4
2,305,226	-				+2.1
2,305,273	+				+0.5
2,305,273	+				+0.8
2,305,274	-				+0.3
2,305,274	-				+0.5
2,305,287	+				+1.1
2,305,288	-				-1.2
2,305,288	-				+0.4
2,305,541	+				+0.1
2,305,541	+				-0.3
2,305,541	+				+0.7
2,305,542	-				-0.8
2,305,542	-				-0.7
2,305,595	+		RR42_RS10785	0.14	+0.7
2,305,595	+		RR42_RS10785	0.14	-1.1
2,305,596	-		RR42_RS10785	0.14	+0.4
2,305,760	+		RR42_RS10785	0.25	-0.2
2,305,760	+		RR42_RS10785	0.25	+1.2
2,305,760	+		RR42_RS10785	0.25	+0.9
2,305,760	+		RR42_RS10785	0.25	-0.4
2,305,820	+		RR42_RS10785	0.29	+0.2
2,305,821	-		RR42_RS10785	0.30	-0.4
2,305,880	+		RR42_RS10785	0.34	-0.0