Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10215

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
2,185,388	+		RR42_RS10210	0.71	+1.5
2,185,388	+		RR42_RS10210	0.71	+0.1
2,185,388	+		RR42_RS10210	0.71	-1.5
2,185,389	-		RR42_RS10210	0.71	-0.4
2,185,389	-		RR42_RS10210	0.71	+0.4
2,185,463	-		RR42_RS10210	0.79	+0.8
2,185,507	+		RR42_RS10210	0.83	-0.2
2,185,547	+		RR42_RS10210	0.87	-0.8
2,185,547	+		RR42_RS10210	0.87	+0.0
2,185,654	+				-4.1
2,185,841	+				-0.5
2,185,858	-				+0.2
2,185,858	-				-0.6
2,185,884	+				-0.7
2,185,887	+				-1.3
2,185,888	-				+0.7
2,185,888	-				+0.2
2,186,045	+				-0.0
2,186,046	-				-0.2
2,186,046	-				-0.4
2,186,268	+		RR42_RS10215	0.11	+0.0
2,186,268	+		RR42_RS10215	0.11	-0.3
2,186,269	-		RR42_RS10215	0.11	-0.8
2,186,448	+		RR42_RS10215	0.27	-0.1
2,186,448	+		RR42_RS10215	0.27	+0.1
2,186,449	-		RR42_RS10215	0.27	+2.4
2,186,450	+		RR42_RS10215	0.27	+0.5
2,186,450	+		RR42_RS10215	0.27	+0.2
2,186,450	+		RR42_RS10215	0.27	-1.3
2,186,451	-		RR42_RS10215	0.27	+0.5
2,186,451	-		RR42_RS10215	0.27	-0.1
2,186,451	-		RR42_RS10215	0.27	-1.7
2,186,640	-		RR42_RS10215	0.45	-2.1
2,186,822	+		RR42_RS10215	0.61	-0.5
2,186,841	-		RR42_RS10215	0.63	-0.7
2,186,876	-		RR42_RS10215	0.66	-0.0
2,187,011	+		RR42_RS10215	0.78	-0.6
2,187,052	+		RR42_RS10215	0.82	-0.7
2,187,052	+		RR42_RS10215	0.82	-1.0
2,187,101	+		RR42_RS10215	0.86	+0.2
2,187,101	+		RR42_RS10215	0.86	-0.2
2,187,102	-		RR42_RS10215	0.86	-0.7
2,187,105	-		RR42_RS10215	0.86	-0.4
2,187,259	+				-0.8
2,187,259	+				-1.2
2,187,259	+				-1.0
2,187,265	-				+0.1
2,187,614	+		RR42_RS10220	0.39	-0.4
2,187,615	-		RR42_RS10220	0.39	+0.4
2,187,615	-		RR42_RS10220	0.39	-0.3
2,187,615	-		RR42_RS10220	0.39	-0.5
2,187,618	+		RR42_RS10220	0.40	-0.7
2,187,743	+		RR42_RS10220	0.66	-0.2
2,187,745	+		RR42_RS10220	0.66	-0.7
2,187,764	-		RR42_RS10220	0.70	+0.3
2,187,884	+				-0.2
2,187,885	-				+1.5
2,187,885	-				+1.6
2,188,134	+		RR42_RS10225	0.21	-0.2
2,188,134	+		RR42_RS10225	0.21	+0.1
2,188,167	+		RR42_RS10225	0.24	-0.6
2,188,167	+		RR42_RS10225	0.24	+0.1