Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09085

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,910,748	+		RR42_RS09080	0.25	-0.2
1,910,748	+		RR42_RS09080	0.25	+0.8
1,910,748	+		RR42_RS09080	0.25	+1.6
1,910,748	+		RR42_RS09080	0.25	-0.4
1,910,749	-		RR42_RS09080	0.25	-0.3
1,910,833	+		RR42_RS09080	0.31	-2.0
1,910,834	-		RR42_RS09080	0.31	+0.6
1,911,037	+		RR42_RS09080	0.47	-1.0
1,911,327	+		RR42_RS09080	0.69	-0.4
1,911,516	-		RR42_RS09080	0.83	-0.5
1,911,516	-		RR42_RS09080	0.83	+0.5
1,911,516	-		RR42_RS09080	0.83	+0.8
1,911,557	-		RR42_RS09080	0.86	-0.5
1,912,094	-		RR42_RS09085	0.65	-1.4
1,912,152	+		RR42_RS09085	0.76	-2.3
1,912,392	+				-1.1
1,912,393	-				-1.1
1,912,413	+				-0.6
1,912,425	+				-0.2
1,912,461	+				-0.2
1,912,474	-				-0.0
1,912,519	-				-0.5
1,912,663	-		RR42_RS09090	0.16	-0.1
1,912,815	+		RR42_RS09090	0.32	-0.3
1,912,815	+		RR42_RS09090	0.32	-0.4
1,912,816	-		RR42_RS09090	0.32	-0.0
1,912,980	+		RR42_RS09090	0.49	+1.1
1,912,980	+		RR42_RS09090	0.49	-2.0
1,912,981	-		RR42_RS09090	0.49	+0.9
1,912,981	-		RR42_RS09090	0.49	+0.2
1,912,981	-		RR42_RS09090	0.49	+0.0
1,913,038	-		RR42_RS09090	0.55	-0.5
1,913,068	-		RR42_RS09090	0.58	-0.1
1,913,068	-		RR42_RS09090	0.58	+0.8
1,913,136	+		RR42_RS09090	0.65	+0.0
1,913,136	+		RR42_RS09090	0.65	+1.4
1,913,137	-		RR42_RS09090	0.66	+5.1
1,913,137	-		RR42_RS09090	0.66	-1.1
1,913,148	+		RR42_RS09090	0.67	-0.4
1,913,186	+		RR42_RS09090	0.71	+1.2