Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08475

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,783,855	+		RR42_RS08460	0.86	+0.6
1,783,927	+				-0.7
1,783,952	+				-0.1
1,783,955	+				-0.6
1,783,956	-				+0.3
1,783,956	-				-1.0
1,783,956	-				+0.2
1,783,964	-				-0.1
1,784,010	+				+0.5
1,784,010	+				+0.1
1,784,036	+				-0.4
1,784,059	+				+1.8
1,784,059	+				-0.3
1,784,060	-				-0.5
1,784,248	+		RR42_RS08465	0.63	+0.5
1,784,249	-		RR42_RS08465	0.64	+0.5
1,784,427	+				-0.2
1,784,427	+				+2.0
1,784,428	-				+0.9
1,784,428	-				-0.3
1,784,518	-				-0.3
1,784,561	+				+1.3
1,784,561	+				+0.9
1,784,562	-				+0.5
1,784,562	-				-0.1
1,784,562	-				-0.4
1,784,570	-				-0.3
1,784,698	-		RR42_RS08470	0.62	-1.2
1,784,796	-				-1.0
1,784,833	-		RR42_RS08475	0.18	-0.9
1,785,045	+		RR42_RS08480	0.21	+0.1
1,785,109	-		RR42_RS08480	0.48	-0.3
1,785,191	+		RR42_RS08480	0.81	-0.6
1,785,287	-				+0.6
1,785,374	-				-0.1
1,785,374	-				-0.6
1,785,551	+				+0.4
1,785,569	-				-0.8
1,785,638	+				-2.0
1,785,638	+				-0.5
1,785,652	+				-0.6
1,785,948	+		RR42_RS08485	0.11	+0.3