Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08460

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,782,070	+				+0.0
1,782,070	+				-0.8
1,782,070	+				+0.1
1,782,071	-				+0.1
1,782,108	+				+0.1
1,782,108	+				+0.3
1,782,201	+		RR42_RS08455	0.35	-0.1
1,782,201	+		RR42_RS08455	0.35	+0.0
1,782,400	+				-0.8
1,782,401	-				-1.7
1,782,401	-				-1.2
1,782,401	-				+0.3
1,782,401	-				+0.8
1,782,401	-				+0.1
1,782,402	+				-0.3
1,782,403	-				-0.2
1,782,403	-				+0.5
1,782,403	-				+1.0
1,782,404	+				+1.6
1,782,404	+				+0.5
1,782,404	+				+0.4
1,782,404	+				+0.1
1,782,404	+				+0.2
1,782,404	+				+0.8
1,782,404	+				-0.9
1,782,404	+				+0.3
1,782,404	+				-0.5
1,782,404	+				+0.9
1,782,404	+				+0.4
1,782,405	-				-0.1
1,782,405	-				-1.9
1,782,405	-				+0.0
1,782,405	-				+0.3
1,782,405	-				+0.5
1,782,405	-				-0.1
1,782,405	-				-1.4
1,782,405	-				-0.4
1,782,405	-				+1.1
1,782,405	-				+0.1
1,782,405	-				+1.1
1,782,408	+				-0.7
1,782,408	+				+0.3
1,782,408	+				-0.1
1,782,408	+				+0.3
1,782,409	-				-0.3
1,782,409	-				+0.0
1,782,457	+				-0.3
1,782,484	+				-0.4
1,782,484	+				+0.6
1,782,485	-				-0.3
1,782,499	+				-0.3
1,782,499	+				+0.2
1,782,499	+				-0.9
1,782,500	-				-0.5
1,782,500	-				-0.6
1,782,581	+				+0.3
1,782,582	-				+0.5
1,782,582	-				-0.1
1,782,583	+				-0.6
1,782,584	-				+0.0
1,782,584	-				-0.0
1,782,584	-				-0.4
1,782,672	+				-0.4
1,782,854	+				+0.1
1,782,855	-				-0.8
1,782,864	+				+1.1
1,782,871	-				-0.6
1,782,876	-				+1.4
1,782,876	-				+0.3
1,782,909	+				+0.3
1,783,101	+		RR42_RS08460	0.11	+1.1
1,783,156	+		RR42_RS08460	0.16	-0.1
1,783,157	-		RR42_RS08460	0.16	+0.3
1,783,230	-		RR42_RS08460	0.24	-0.4
1,783,339	-		RR42_RS08460	0.35	+0.2
1,783,529	+		RR42_RS08460	0.53	+1.1
1,783,530	-		RR42_RS08460	0.54	+0.6
1,783,554	+		RR42_RS08460	0.56	+0.3
1,783,554	+		RR42_RS08460	0.56	-0.3
1,783,558	+		RR42_RS08460	0.56	+0.3
1,783,559	-		RR42_RS08460	0.56	+1.0
1,783,559	-		RR42_RS08460	0.56	+0.2
1,783,855	+		RR42_RS08460	0.86	+0.6
1,783,927	+				-0.7
1,783,952	+				-0.1
1,783,955	+				-0.6
1,783,956	-				+0.3
1,783,956	-				-1.0
1,783,956	-				+0.2
1,783,964	-				-0.1
1,784,010	+				+0.5
1,784,010	+				+0.1
1,784,036	+				-0.4
1,784,059	+				+1.8
1,784,059	+				-0.3
1,784,060	-				-0.5
1,784,248	+		RR42_RS08465	0.63	+0.5
1,784,249	-		RR42_RS08465	0.64	+0.5
1,784,427	+				-0.2
1,784,427	+				+2.0
1,784,428	-				+0.9
1,784,428	-				-0.3
1,784,518	-				-0.3
1,784,561	+				+1.3
1,784,561	+				+0.9
1,784,562	-				+0.5
1,784,562	-				-0.1
1,784,562	-				-0.4
1,784,570	-				-0.3
1,784,698	-		RR42_RS08470	0.62	-1.2
1,784,796	-				-1.0
1,784,833	-		RR42_RS08475	0.18	-0.9