Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07885

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,691,628	+		RR42_RS07880	0.29	-0.4
1,691,628	+		RR42_RS07880	0.29	-0.9
1,691,628	+		RR42_RS07880	0.29	-0.4
1,691,628	+		RR42_RS07880	0.29	-0.3
1,691,628	+		RR42_RS07880	0.29	-1.8
1,691,629	-		RR42_RS07880	0.29	-1.0
1,691,629	-		RR42_RS07880	0.29	-0.9
1,691,629	-		RR42_RS07880	0.29	-0.2
1,691,647	+		RR42_RS07880	0.31	-1.3
1,691,648	-		RR42_RS07880	0.31	-1.3
1,691,719	+		RR42_RS07880	0.36	-0.1
1,691,719	+		RR42_RS07880	0.36	-1.0
1,691,720	-		RR42_RS07880	0.36	-0.9
1,692,073	-		RR42_RS07880	0.62	+1.1
1,692,149	-		RR42_RS07880	0.68	-1.2
1,692,180	+		RR42_RS07880	0.70	-0.4
1,692,181	-		RR42_RS07880	0.70	+0.4
1,692,181	-		RR42_RS07880	0.70	-0.9
1,692,317	-		RR42_RS07880	0.80	-0.2
1,692,383	-		RR42_RS07880	0.85	-1.2
1,692,383	-		RR42_RS07880	0.85	-0.8
1,692,383	-		RR42_RS07880	0.85	-2.0
1,692,383	-		RR42_RS07880	0.85	-0.5
1,692,470	-				-2.2
1,692,485	+				-1.3
1,692,599	+				-1.6
1,692,599	+				-2.8
1,692,626	+				-0.7
1,692,626	+				-1.0
1,692,626	+				-1.3
1,692,627	-				-1.2
1,692,627	-				-0.3
1,692,627	-				-1.1
1,692,735	-		RR42_RS07885	0.19	-1.8
1,693,162	+		RR42_RS07885	0.78	-1.7
1,693,163	-		RR42_RS07885	0.78	-1.2
1,693,163	-		RR42_RS07885	0.78	-2.0
1,693,219	+		RR42_RS07885	0.86	+2.1
1,693,219	+		RR42_RS07885	0.86	-0.5
1,693,219	+		RR42_RS07885	0.86	-0.7
1,693,220	-		RR42_RS07885	0.86	-1.6
1,693,220	-		RR42_RS07885	0.86	+0.3
1,693,220	-		RR42_RS07885	0.86	-2.4
1,693,225	+		RR42_RS07885	0.87	-0.2
1,693,225	+		RR42_RS07885	0.87	-0.9
1,693,226	-		RR42_RS07885	0.87	-3.7
1,693,326	+				-2.4
1,693,332	-				+0.6
1,693,372	+				-1.3
1,693,373	-				+0.3
1,693,373	-				-0.2
1,693,376	+				-0.7
1,693,376	+				-2.4
1,693,376	+				-2.7
1,693,377	-				+0.2
1,693,377	-				+0.9
1,693,377	-				+0.5
1,693,391	+				-2.3
1,693,419	-				+1.5
1,693,479	+				-0.2
1,693,479	+				+0.3
1,693,480	-				+0.9
1,693,511	+				-1.7
1,693,571	+				-2.3
1,693,572	-				+1.2
1,693,572	-				+1.5
1,693,650	+		RR42_RS07890	0.22	+1.6
1,693,651	-		RR42_RS07890	0.22	+0.8
1,693,750	+		RR42_RS07890	0.51	+1.1
1,693,883	-				+0.9
1,693,903	+				+1.6
1,693,903	+				+0.7
1,693,903	+				+1.4
1,693,904	-				+1.0
1,693,904	-				+1.1
1,693,904	-				+0.1
1,693,904	-				+0.7
1,693,915	+				+3.1
1,693,916	-				+0.5
1,693,916	-				+0.5
1,694,072	+				+0.7
1,694,073	-				-0.1
1,694,073	-				+0.6