Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07840

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,679,058	+		RR42_RS07835	0.38	-0.4
1,679,059	-		RR42_RS07835	0.38	+0.5
1,679,070	+		RR42_RS07835	0.38	-0.3
1,679,070	+		RR42_RS07835	0.38	+0.1
1,679,070	+		RR42_RS07835	0.38	+0.1
1,679,070	+		RR42_RS07835	0.38	-0.3
1,679,070	+		RR42_RS07835	0.38	-0.3
1,679,070	+		RR42_RS07835	0.38	+0.2
1,679,071	-		RR42_RS07835	0.39	+0.9
1,679,071	-		RR42_RS07835	0.39	+0.2
1,679,071	-		RR42_RS07835	0.39	+1.2
1,679,071	-		RR42_RS07835	0.39	-0.3
1,679,071	-		RR42_RS07835	0.39	+0.7
1,679,071	-		RR42_RS07835	0.39	+0.3
1,679,082	+		RR42_RS07835	0.39	-1.2
1,679,082	+		RR42_RS07835	0.39	-0.3
1,679,224	-		RR42_RS07835	0.50	-0.2
1,679,224	-		RR42_RS07835	0.50	-0.3
1,679,224	-		RR42_RS07835	0.50	+1.7
1,679,224	-		RR42_RS07835	0.50	+1.0
1,679,226	+		RR42_RS07835	0.50	-0.5
1,679,227	-		RR42_RS07835	0.50	-2.1
1,679,227	-		RR42_RS07835	0.50	-0.1
1,679,512	-		RR42_RS07835	0.72	+0.3
1,679,601	+		RR42_RS07835	0.79	-0.4
1,679,737	-		RR42_RS07835	0.90	-0.3
1,680,309	+		RR42_RS07840	0.27	+0.0
1,680,309	+		RR42_RS07840	0.27	+0.3
1,680,310	-		RR42_RS07840	0.28	-1.7
1,680,469	-		RR42_RS07840	0.41	-0.4
1,680,705	+		RR42_RS07840	0.60	-0.5
1,680,706	-		RR42_RS07840	0.60	+1.5
1,680,706	-		RR42_RS07840	0.60	+0.6
1,680,751	-		RR42_RS07840	0.64	-1.0
1,680,751	-		RR42_RS07840	0.64	-1.3
1,680,751	-		RR42_RS07840	0.64	+0.0
1,680,922	+		RR42_RS07840	0.78	-0.4
1,681,011	+		RR42_RS07840	0.86	+0.7
1,681,012	-		RR42_RS07840	0.86	-0.7
1,681,012	-		RR42_RS07840	0.86	-0.2
1,681,012	-		RR42_RS07840	0.86	-0.1
1,681,101	+				-0.2
1,681,101	+				-0.5
1,681,101	+				+0.5
1,681,102	-				+0.3
1,681,102	-				+0.1
1,681,222	+				-1.3
1,681,222	+				-0.6
1,681,223	-				-0.5
1,681,223	-				-0.7
1,681,721	+		RR42_RS07845	0.10	+0.5
1,681,722	-		RR42_RS07845	0.10	+1.0
1,681,878	-		RR42_RS07845	0.15	+0.5
1,681,970	+		RR42_RS07845	0.17	+1.3
1,681,971	-		RR42_RS07845	0.17	+1.0
1,682,063	+		RR42_RS07845	0.20	+0.9
1,682,064	-		RR42_RS07845	0.20	+1.2
1,682,064	-		RR42_RS07845	0.20	+0.3
1,682,069	+		RR42_RS07845	0.20	+1.4
1,682,069	+		RR42_RS07845	0.20	-2.7
1,682,069	+		RR42_RS07845	0.20	+1.2
1,682,069	+		RR42_RS07845	0.20	+2.7
1,682,069	+		RR42_RS07845	0.20	+0.2