Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07590

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,624,841	+				-1.7
1,624,850	+				-1.3
1,624,850	+				-2.7
1,624,851	-				-0.9
1,624,851	-				-0.6
1,625,667	-				+0.8
1,625,785	-		RR42_RS07590	0.11	+0.4
1,626,083	+		RR42_RS07590	0.36	+2.6
1,626,083	+		RR42_RS07590	0.36	+2.0
1,626,083	+		RR42_RS07590	0.36	+1.8
1,626,084	-		RR42_RS07590	0.36	+0.4
1,626,169	-		RR42_RS07590	0.43	+2.0
1,626,332	+		RR42_RS07590	0.56	+2.6
1,626,333	-		RR42_RS07590	0.56	+1.6
1,626,466	+		RR42_RS07590	0.67	+3.1
1,626,596	+		RR42_RS07590	0.78	+4.3
1,626,597	-		RR42_RS07590	0.78	+2.1
1,626,724	-		RR42_RS07590	0.89	+2.6
1,626,724	-		RR42_RS07590	0.89	+2.0
1,626,724	-		RR42_RS07590	0.89	+3.0
1,626,845	+				+2.2
1,626,875	-				-0.0
1,626,875	-				-1.3
1,626,875	-				+0.4
1,626,952	-		RR42_RS07595	0.12	+0.5
1,627,488	+		RR42_RS07595	0.79	-0.0
1,627,488	+		RR42_RS07595	0.79	+0.2
1,627,488	+		RR42_RS07595	0.79	+0.6
1,627,489	-		RR42_RS07595	0.79	-0.2
1,627,499	+		RR42_RS07595	0.80	+1.6
1,627,500	-		RR42_RS07595	0.81	+0.6
1,627,500	-		RR42_RS07595	0.81	+0.2
1,627,503	+		RR42_RS07595	0.81	+0.4
1,627,503	+		RR42_RS07595	0.81	+0.5
1,627,503	+		RR42_RS07595	0.81	+0.3
1,627,503	+		RR42_RS07595	0.81	-0.2
1,627,503	+		RR42_RS07595	0.81	-0.2
1,627,504	-		RR42_RS07595	0.81	+0.6
1,627,504	-		RR42_RS07595	0.81	-0.1
1,627,504	-		RR42_RS07595	0.81	+0.6
1,627,504	-		RR42_RS07595	0.81	+1.3
1,627,504	-		RR42_RS07595	0.81	+0.4
1,627,593	+				-0.3
1,627,593	+				+0.2
1,627,594	-				-0.1
1,627,600	-				+0.2
1,627,805	+		RR42_RS07600	0.52	-0.6
1,627,805	+		RR42_RS07600	0.52	-0.5
1,627,806	-		RR42_RS07600	0.52	-1.8
1,627,806	-		RR42_RS07600	0.52	-0.2
1,627,806	-		RR42_RS07600	0.52	-0.9
1,627,806	-		RR42_RS07600	0.52	-0.1
1,627,806	-		RR42_RS07600	0.52	-0.7
1,627,835	+		RR42_RS07600	0.64	+0.4
1,627,836	-		RR42_RS07600	0.64	-0.9
1,627,836	-		RR42_RS07600	0.64	-1.6
1,627,836	-		RR42_RS07600	0.64	-1.5