Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS07235

Experiment: R2A with Polymyxin B sulfate 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.005 mg/ml
1,541,661	+				-0.1
1,541,662	-				+0.1
1,541,738	+				+0.2
1,541,750	-				-1.1
1,541,766	-				+0.3
1,541,766	-				+0.1
1,541,899	+				+0.6
1,541,899	+				+0.1
1,541,900	-				+0.4
1,541,925	-				-0.3
1,541,925	-				+0.4
1,541,925	-				+0.1
1,542,205	+		RR42_RS07230	0.54	-0.5
1,542,205	+		RR42_RS07230	0.54	+0.4
1,542,206	-		RR42_RS07230	0.54	-1.1
1,542,207	+		RR42_RS07230	0.54	-0.8
1,542,228	+		RR42_RS07230	0.60	-1.3
1,542,229	-		RR42_RS07230	0.60	+0.1
1,542,232	+		RR42_RS07230	0.61	-0.6
1,542,233	-		RR42_RS07230	0.62	+0.3
1,542,233	-		RR42_RS07230	0.62	-0.0
1,542,233	-		RR42_RS07230	0.62	-0.0
1,542,268	+		RR42_RS07230	0.71	+0.0
1,542,315	+		RR42_RS07230	0.84	+1.2
1,542,316	-		RR42_RS07230	0.84	+0.1
1,542,374	+				+0.3
1,542,387	-				-2.4
1,542,391	-				+0.8
1,542,391	-				+0.5
1,542,391	-				-1.2
1,542,523	+				-0.4
1,542,637	+				+1.2
1,542,776	+		RR42_RS07235	0.44	+1.4
1,542,776	+		RR42_RS07235	0.44	-1.0
1,542,777	-		RR42_RS07235	0.44	+0.4
1,542,815	+		RR42_RS07235	0.57	+0.1
1,542,815	+		RR42_RS07235	0.57	-1.7
1,542,816	-		RR42_RS07235	0.58	-0.9
1,542,936	+				+0.7
1,542,936	+				-0.5
1,542,936	+				+0.0
1,542,936	+				-0.2
1,542,937	-				-0.4
1,542,937	-				-0.6
1,542,937	-				-0.9
1,542,937	-				-0.9
1,542,937	-				-0.8
1,542,937	-				-0.7
1,542,937	-				-0.5
1,542,937	-				-0.5
1,542,938	+				+0.7
1,542,938	+				+0.5
1,542,938	+				-0.3
1,542,938	+				-2.4
1,542,938	+				+0.5
1,542,938	+				-1.2
1,542,938	+				-0.2
1,542,939	-				-0.3
1,542,939	-				-2.0
1,542,939	-				-1.1
1,542,939	-				-1.5
1,542,939	-				-1.5
1,542,939	-				-1.6
1,542,939	-				-2.5
1,542,939	-				+0.3
1,542,939	-				-1.8
1,543,015	+				-1.8
1,543,213	+				+0.7
1,543,218	+				+0.8
1,543,249	+				-0.4
1,543,249	+				+0.2
1,543,283	+				+0.2
1,543,321	+				-0.3
1,543,339	+				-0.2
1,543,339	+				+3.2
1,543,340	-				-1.1
1,543,346	-				-0.8
1,543,353	-				-1.3
1,543,431	+				+0.7
1,543,661	+				+0.1
1,543,661	+				-1.5